Job Description P19624 Confidence 100.00% Date Thu Jan 5 11:37:23 GMT 2012 Rank 6 Aligned Residues 276 % Identity 14% Template d1vi1a_ SCOP info Isocitrate/Isopropylmalate dehydrogenase-like Isocitrate/Isopropylmalate dehydrogenase-like PlsX-like Resolution 2.95

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		6	.	.	.	10	.			.	.	.	.	.	.	.	.	20	.	.	.	.					.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure								.	.														.	.	.	.
Query SS confidence								.	.														.	.	.	.
Query Sequence		R	V	V	I	T	P	.	.	G	E	P	A	G	I	G	P	D	L	V	V	Q	.	.	.	.	L	A	Q	R	E	W	P	V	E	L	V	V	C	A	D	A	T	L	L	T	N	R	A	A	M	L	G	L	P	L	T	L	R	P	Y	S	P	N	S	P	A	Q	P	Q	T	A	G	T	L	T	L	L	P	V	A
Query Conservation								.	.														.	.	.	.
Alig confidence								.	.					.	.	.							.	.	.	.																												.	.																	.	.	.	.	.	.	.	.	.	.
Template Conservation														.	.	.																																						.	.																	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	I	A	V	D	A	X	G	G	D	H	A	.	.	.	P	K	A	V	I	D	G	V	I	K	G	I	E	A	F	D	D	L	H	I	T	L	V	G	D	K	T	T	I	E	S	H	L	T	T	T	S	.	.	D	R	I	T	V	L	H	A	D	E	V	I	E	P	T	D	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure							S	S		S	S	S	T	.	.	.	T															T	T														T	T			S			.	.	T	T								B				T	T	S	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure														.	.	.																																						.	.																	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.				.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50			.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	A	P	V	T	A	G	Q	L	A	V	E	N	G	H	Y	V	V	E	T	L	A	R	A	C	D	G	C	L	N	G	E	F	A	A	L	I	T	G	P	V	H	K	G	V	I	N	D	A	G	I	P	F	T	G	H	T	E	F	F	E	E	R	S	Q	A	K	K	V	V	M	M	L	A	T	E	E	L	R
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.																																														.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.																																														.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	E	P	V	R	A	V	R	R	K	K	N	S	S	X	V	L	X	A	Q	E	V	A	E	N	R	A	D	A	C	I	S	A	G	N	T	G	A	L	X	T	A	G	L	F	I	.	.	.	.	.	.	.	V	G	R	I	K	G	I	D	R	P	A	L	A	P	T	L	P	T	V	S
Template Known Secondary structure		.	.	.	.	.	.	.	.										T	T	B											T	T	S		S						S												T	.	.	.	.	.	.	.	T		B		T	T		S	S										S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.																																														.	.	.	.	.	.	.
Template SS confidence
										67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.								.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
		160		.	.	.	.	.	.	.	.	.	170	.	.	.	.	.			.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure			.																.	.
Query SS confidence			.																.	.
Query Sequence		V	.	A	L	A	T	T	H	L	P	L	R	D	I	A	D	A	.	.	I	T	P	A	L	L	H	E	V	I	A	I	L	H	H	D	L	R	T	K	F	G	I	A	E	P	R	I	L	V	C	G	L	N	P	H	A	G	E	G	G	H	M	G	T	E	E	I	D	T	I	I	P	V	L	N	E	L	R	A	Q
Query Conservation			.																.	.
Alig confidence			.				.	.	.	.	.								.	.																																		.	.	.	.									.	.	.
Template Conservation							.	.	.	.	.																																											.	.	.	.									.	.	.
Template Sequence		G	D	G	F	L	.	.	.	.	.	L	L	D	V	G	A	N	V	D	A	K	P	E	H	L	V	Q	Y	A	I	X	G	S	V	Y	S	Q	Q	V	R	G	V	T	S	P	R	V	G	L	L	N	V	.	.	.	.	G	T	E	D	K	K	G	N	.	.	.	E	L	T	K	Q	T	F	Q	I	L	K	E	T
Template Known Secondary structure		S					.	.	.	.	.				S	S	S		S	S																				T	S			S	S								S	.	.	.	.	S	S	S	T	T		S		.	.	.												S
Template Predicted Secondary structure							.	.	.	.	.																																											.	.	.	.									.	.	.
Template SS confidence
		132	.	.	.	.						.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.					.	180	.	.	.	.	.	.				.	.	.	190	.	.	.	.	.	.	.	.	.
		237		.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.														.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.				.	.	.
Predicted Secondary structure			.																																									.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.
Query SS confidence			.																																									.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.
Query Sequence		G	.	M	K	L	N	G	P	L	P	A	D	T	L	F	Q	P	K	Y	L	D	N	A	D	A	V	L	A	M	Y	H	D	Q	G	L	P	V	L	K	Y	Q	G	.	.	.	.	.	.	.	.	.	.	.	.	.	F	G	R	G	V	N	I	T	L	G	L	P	F	I	R	T	S	V	D	.	.	.	H	G	T
Query Conservation			.																																									.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.
Alig confidence			.															.	.	.	.												.											.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.
Template Conservation																		.	.	.	.												.
Template Sequence		A	N	I	N	F	I	G	N	V	E	A	R	D	L	L	D	.	.	.	.	D	V	A	D	V	V	V	T	D	G	F	.	T	G	N	V	T	L	K	T	L	E	G	S	A	L	S	I	F	K	X	X	R	D	V	X	T	S	T	L	V	L	K	P	K	L	K	E	X	K	X	K	X	E	Y	S	N	Y	G	G
Template Known Secondary structure		T	T	S								G	G	G	G	G	G	.	.	.	.	T	S		S								.																									T	T	T																G	G	G	S
Template Predicted Secondary structure																		.	.	.	.												.
Template SS confidence
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.					.	.	.	.	220	.	.	.	.	.	.		.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
		300								.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.
Predicted Secondary structure			.	.	.	.	.	.	.
Query SS confidence			.	.	.	.	.	.	.
Query Sequence		A	.	.	.	.	.	.	.	L	E	L	A	G	R	G	K	A	D	V	G	S	F	I	T	A	L	N	L	A	I	K	M	I	V	N	T
Query Conservation			.	.	.	.	.	.	.
Alig confidence			.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	S	L	F	G	L	K	A	P	V	I	K	A	H	G	S	S	D	S	N	A	V	F	R	A	I	R	Q	A	R	E	X	V	S	Q	N
Template Known Secondary structure						T	B	S	S							T	T																			T	T
Template Predicted Secondary structure
Template SS confidence
		282	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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