Job Description P19624 Confidence 100.00% Date Thu Jan 5 11:37:23 GMT 2012 Rank 5 Aligned Residues 272 % Identity 16% Template d1u7na_ SCOP info Isocitrate/Isopropylmalate dehydrogenase-like Isocitrate/Isopropylmalate dehydrogenase-like PlsX-like Resolution 2.26

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		5	.	.	.	.	10	.			.	.	.	.	.	.	.	.	20	.	.	.	.					.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure									.	.														.	.	.	.
Query SS confidence									.	.														.	.	.	.
Query Sequence		Q	R	V	V	I	T	P	.	.	G	E	P	A	G	I	G	P	D	L	V	V	Q	.	.	.	.	L	A	Q	R	E	W	P	V	E	L	V	V	C	A	D	A	T	L	L	T	N	R	A	A	M	L	G	L	P	L	T	L	R	P	Y	S	P	N	S	P	A	Q	P	Q	T	A	G	T	L	T	L	L	P	V
Query Conservation									.	.														.	.	.	.
Alig confidence									.	.					.	.	.							.	.	.	.																												.	.	.																.	.	.	.	.	.	.	.	.
Template Conservation															.	.	.																																						.	.	.																.	.	.	.	.	.	.	.	.
Template Sequence		X	K	I	A	V	D	A	X	G	G	D	N	A	.	.	.	P	Q	A	I	V	E	G	V	X	L	A	K	Q	D	F	P	D	I	E	F	Q	L	Y	G	K	E	A	E	I	K	K	Y	I	T	D	E	K	.	.	.	N	I	T	I	I	H	T	D	E	K	I	A	S	D	D	.	.	.	.	.	.	.	.	.
Template Known Secondary structure								S	S		S	T	T	T	.	.	.	T															T	T														T	T		S			T	.	.	.	T							S					T	T		.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure															.	.	.																																						.	.	.																.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.				.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50				.	.	.	.	.	.	.	.	.	60	.	.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	R	A	P	V	T	A	G	Q	L	A	V	E	N	G	H	Y	V	V	E	T	L	A	R	A	C	D	G	C	L	N	G	E	F	A	A	L	I	T	G	P	V	H	K	G	V	I	N	D	A	G	I	P	F	T	G	H	T	E	F	F	E	E	R	S	Q	A	K	K	V	V	M	M	L	A	T	E	E	L
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.																																													.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.																																													.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	E	P	V	K	A	I	R	R	K	K	T	A	S	X	V	L	A	A	Q	A	V	K	N	G	E	A	D	A	I	F	S	A	G	N	T	G	A	L	L	A	A	G	L	F	.	.	.	.	.	.	.	I	V	G	R	I	K	N	V	E	R	P	G	L	X	S	T	L	P	V	X
Template Known Secondary structure		.	.	.	.	.	.	.	.	.										T	T	S												T	S		S					S	S												.	.	.	.	.	.	.	T	T		B		T	T		S	S										T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.																																													.	.	.	.	.	.	.
Template SS confidence
											66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.								110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
					159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.			.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure		.	.	.																		.	.
Query SS confidence		.	.	.																		.	.
Query Sequence		.	.	.	R	V	A	L	A	T	T	H	L	P	L	R	D	I	A	D	A	.	.	I	T	P	A	L	L	H	E	V	I	A	I	L	H	H	D	L	R	T	K	F	G	I	A	E	P	R	I	L	V	C	G	L	N	P	H	A	G	E	G	G	H	M	G	T	E	E	I	D	T	I	I	P	V	L	N	E	L
Query Conservation		.	.	.																		.	.
Alig confidence		.	.	.						.	.	.	.	.								.	.																																		.	.	.	.		.	.	.	.				.	.	.
Template Conservation										.	.	.	.	.																																											.	.	.	.		.	.	.	.				.	.	.
Template Sequence		G	E	P	D	K	G	F	D	.	.	.	.	.	X	L	D	L	G	A	N	A	D	N	K	P	E	H	L	V	Q	Y	A	V	L	G	S	F	Y	A	E	K	V	R	N	V	Q	N	P	R	V	G	L	L	N	N	.	.	.	.	G	.	.	.	.	T	G	S	.	.	.	E	L	T	K	K	A	F	E	L	L
Template Known Secondary structure		T		T	T					.	.	.	.	.				S	S	S		S																					T	T			S	S								S	.	.	.	.		.	.	.	.				.	.	.
Template Predicted Secondary structure										.	.	.	.	.																																											.	.	.	.		.	.	.	.				.	.	.
Template SS confidence
		130	.	.	.	.	.	.	.						.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.					180					.	.	.				.	.	.	.	.	.	190	.	.	.
		234	.		.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.															.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
Predicted Secondary structure				.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.
Query SS confidence				.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.
Query Sequence		R	A	.	Q	G	M	K	L	N	G	P	L	P	A	D	T	L	F	Q	P	K	Y	L	D	N	A	D	A	V	L	A	M	Y	H	D	Q	G	L	P	V	L	K	Y	Q	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	G	R	G	V	N	I	T	L	G	L	P	F	I	R	T	S	V	D	.	.
Query Conservation				.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.
Alig confidence				.																	.	.	.	.												.											.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.
Template Conservation																					.	.	.	.												.
Template Sequence		A	A	D	E	T	I	N	F	V	G	N	V	E	A	R	E	L	L	N	.	.	.	.	G	V	A	D	V	V	V	T	D	G	F	.	T	G	N	A	V	L	K	S	I	E	G	T	A	X	N	X	X	S	L	L	K	T	A	I	L	S	G	A	L	L	L	K	N	A	L	H	G	X	K	D	E	X	D	Y	S
Template Known Secondary structure					T	T	S								G	G	G	G	G	G	.	.	.	.		S		S								.																									T																	T		G	G
Template Predicted Secondary structure																					.	.	.	.												.
Template SS confidence
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.					.	.	.	220	.	.	.	.	.	.	.		.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
			297	.	.	300								.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.
Predicted Secondary structure		.					.	.	.	.	.	.	.
Query SS confidence		.					.	.	.	.	.	.	.
Query Sequence		.	H	G	T	A	.	.	.	.	.	.	.	L	E	L	A	G	R	G	K	A	D	V	G	S	F	I	T	A	L	N	L	A	I	K	M	I	V	N	T
Query Conservation		.					.	.	.	.	.	.	.
Alig confidence		.					.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	H	G	G	A	V	L	F	G	L	K	A	P	V	I	K	T	H	G	A	T	G	P	D	A	V	R	Y	T	I	R	Q	I	H	T	X	L	E	T	Q
Template Known Secondary structure		G	G							T	B	S	S							T	T																			T	T
Template Predicted Secondary structure
Template SS confidence
		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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