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Job DescriptionP19624
Confidence100.00%DateThu Jan 5 11:37:23 GMT 2012
Rank2Aligned Residues328
% Identity98%Templated1ptma_
SCOP infoIsocitrate/Isopropylmalate dehydrogenase-like Isocitrate/Isopropylmalate dehydrogenase-like PdxA-like
Resolution1.96

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  VKTQRVVITPGEPAGIGPDLVVQLAQREWPVELVVCADATLLTNRAAMLGLPLTLRPYSPNSPAQPQTAGTLTLLPVALR
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Template Sequence  VKTQRVVITPGEPAGIGPDLVVQLAQREWPVELVVCADATLLTNRAAXLGLPLTLRPYSPNSPAQPQTAGTLTLLPVALR
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STTSSTTS

SS
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TT


S
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   2.......10.........20.........30.........40.........50.........60.........70.........80.
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
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Query Sequence  APVTAGQLAVENGHYVVETLARACDGCLNGEFAALITGPVHKGVINDAGIPFTGHTEFFEERSQAKKVVMMLATEELRVA
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Template Sequence  APVTAGQLAVENGHYVVETLARACDGCLNGEFAALITGPVHKGVINDAGIPFTGHTEFFEERSQAKKVVXXLATEELRVA
Template Known Secondary structure  S

BTTB

TTTS
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TT




TT
S

SSS
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   82.......90.........100.........110.........120.........130.........140.........150.........160.
 
   162.......170.........180.........190.........200.........210.........220.........230.........240.
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Query Sequence  LATTHLPLRDIADAITPALLHEVIAILHHDLRTKFGIAEPRILVCGLNPHAGEGGHMGTEEIDTIIPVLNELRAQGMKLN
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Template Sequence  LATTHLPLRDIADAITPALLHEVIAILHHDLRTKFGIAEPRILVCGLNPHAGEGGHXGTEEIDTIIPVLNELRAQGXKLN
Template Known Secondary structure  SS
SS
GGG

TT

SS

SSGGGGGGGTT
STTT
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   162.......170.........180.........190.........200.........210.........220.........230.........240.
 
   242.......250.........260.........270.........280.........290.........300.........310.........320.
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Query Sequence  GPLPADTLFQPKYLDNADAVLAMYHDQGLPVLKYQGFGRGVNITLGLPFIRTSVDHGTALELAGRGKADVGSFITALNLA
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Template Sequence  GPLPADTLFQPKYLDNADAVLAXYHDQGLPVLKYQGFGRGVNITLGLPFIRTSVDHGTALELAGRGKADVGSFITALNLA
Template Known Secondary structure 
SSTT
SSSTT
SSS
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   242.......250.........260.........270.........280.........290.........300.........310.........320.
 
   322.......
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Query Sequence  IKMIVNTQ
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Template Conservation       
  
Template Sequence  IKXIVNTQ
Template Known Secondary structure 
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   322.......
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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