Job Description P19624 Confidence 98.28% Date Thu Jan 5 11:37:23 GMT 2012 Rank 26 Aligned Residues 263 % Identity 21% Template d1hqsa_ SCOP info Isocitrate/Isopropylmalate dehydrogenase-like Isocitrate/Isopropylmalate dehydrogenase-like Dimeric isocitrate & isopropylmalate dehydrogenases Resolution 1.55

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.				50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																	.	.	.
Query SS confidence																																																	.	.	.
Query Sequence		K	T	Q	R	V	V	I	T	P	G	E	P	A	G	I	G	P	D	L	V	V	Q	L	A	Q	R	E	W	P	V	E	L	V	V	C	A	D	A	T	L	L	T	N	R	A	A	M	.	.	.	L	G	L	P	L	T	L	R	P	Y	S	P	N	S	P	A	Q	P	Q	T	A	G	T	L	T	L	L	P	V	A
Query Conservation																																																	.	.	.
Alig confidence													.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.																											.	.	.	.
Template Conservation													.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.																																							.	.	.	.
Template Sequence		N	N	P	I	I	P	F	I	E	G	D	.	.	G	T	G	P	D	I	W	N	A	A	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	V	L	E	A	A	V	E	K	A	Y	K	G	E	K	K	I	T	W	K	E	V	Y	A	G	E	K	A	Y	N	K	T	G	E	W	L	P	A	.	.	.	.
Template Known Secondary structure		S	S	B								S	.	.	T	T										.	.	.	.	.	.	.	.	.	.	.	.	.	.												T	T	S											T								S		S	S			.	.	.	.
Template Predicted Secondary structure													.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.																																							.	.	.	.
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.			.	30	.	.	.	.	.	.	.	.	.															40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.			.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure																																																																				.	.											.	.
Query SS confidence																																																																				.	.											.	.
Query Sequence		L	R	A	P	V	T	A	G	Q	L	A	V	E	N	G	H	Y	V	V	E	T	L	A	R	A	C	D	G	C	L	N	G	E	F	A	A	L	I	T	G	P	V	H	K	G	V	I	N	D	A	G	I	P	F	T	G	H	T	E	F	F	E	E	R	S	Q	.	.	A	K	K	V	V	M	M	L	A	T	.	.
Query Conservation																																																																				.	.											.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.												.	.	.	.																				.	.											.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.												.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	T	L	D	V	I	R	.	.	E	Y	F	I	A	I	K	G	P	L	T	.	.	.	.	T	P	V	G	G	G	I	R	S	L	N	V	A	L	R	Q	E	L	D	L	F	V	L	R	P	V	R	Y	F	T	G	V	P
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.												.	.	.	.			S	S	S	S	S											T	T											T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.												.	.	.	.
Template SS confidence
																									78	.	80	.	.	.	.			.	.	.	.	.	90	.	.	.	.	.					.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
								156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.																																					.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure		.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	E	E	L	R	V	A	L	A	T	T	H	L	P	L	R	D	I	A	D	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	T	P	A	L	L	H	E	V	I	A	I	L	H	H	D	L	R
Query Conservation		.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	P	V	K	R	P	E	D	T	D	M	V	I	F	R	E	N	T	E	D	I	Y	A	G	I	E	Y	A	K	G	S	E	E	V	Q	K	L	I	S	F	L	Q	N	E	L	N	V	N	K	I	R	F	P	E	T	S	G	I	G	I	K	P	V	S	E	E	G	T	S	R	L	V	R	A	A	I	D	Y	A	I
Template Known Secondary structure			S	S	S		G	G	G										S		G	G	G	G						T	T															S						S		G	G	G
Template Predicted Secondary structure
Template SS confidence
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.																																		.	.	.	.	240
Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	K	F	G	I	A	E	P	R	I	L	V	C	G	L	N	P	H	A	G	E	G	G	H	M	G	T	E	E	I	D	T	I	I	P	V	L	N	E	L	R	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	G	M	K	L
Query Conservation																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.	.	.									.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation				.	.	.									.	.	.	.	.	.
Template Sequence		E	H	.	.	.	G	R	K	S	V	T	L	V	.	.	.	.	.	.	H	K	G	N	I	M	K	F	T	E	G	A	F	K	N	W	G	Y	E	L	A	E	K	E	Y	G	D	K	V	F	T	W	A	Q	Y	D	R	I	A	E	E	Q	G	K	D	A	A	N	K	A	Q	S	E	A	E	A	A	G	K	I	I
Template Known Secondary structure				.	.	.	T		S						.	.	.	.	.	.			T	T	T	S	T	T	T																	G	G	G																													T	T
Template Predicted Secondary structure				.	.	.									.	.	.	.	.	.
Template SS confidence
		210	.				.	.	.	.	.	.	.	.							220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.			.	.	.	.	260	.	.	.			.	.	.	.					.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
Predicted Secondary structure																	.	.									.	.					.	.	.	.
Query SS confidence																	.	.									.	.					.	.	.	.
Query Sequence		N	G	P	L	P	A	D	T	L	F	Q	P	K	Y	L	.	.	D	N	A	D	A	V	L	A	.	.	M	Y	H	D	.	.	.	.	Q	G	L	P	V	L	K	Y	Q	G	F	G	R	G	V	N	I	T	L	G	L	P	F	I	R	T	S	V	D	H	G	T	A	L	E	L	A	G	R	G	K	A	D	V	G
Query Conservation																	.	.									.	.					.	.	.	.
Alig confidence																	.	.									.	.					.	.	.	.
Template Conservation
Template Sequence		I	K	D	S	I	A	D	I	F	L	Q	Q	I	L	T	R	P	N	E	F	D	V	V	A	T	M	N	L	N	G	D	Y	I	S	D	A	L	A	A	Q	V	G	G	I	G	I	A	P	G	A	N	I	N	Y	E	T	G	H	A	I	F	E	A	T	H	G	T	A	P	K	Y	A	G	L	D	K	V	N	P	S
Template Known Secondary structure																		G	G	G		S																				T	T		T	T	T								T	T	T								S					G	G	G	T	T	T	T		S
Template Predicted Secondary structure
Template SS confidence
		281	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360
		313	.	.	.	.	.	.	320	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	F	I	T	A	L	N	L	A	I	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	V	I	L	S	G	V	L	L	L	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		361	.	.	.	.	.	.	.	.	370	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions