Job Description P19624 Confidence 98.65% Date Thu Jan 5 11:37:23 GMT 2012 Rank 18 Aligned Residues 252 % Identity 18% Template d1a05a_ SCOP info Isocitrate/Isopropylmalate dehydrogenase-like Isocitrate/Isopropylmalate dehydrogenase-like Dimeric isocitrate & isopropylmalate dehydrogenases Resolution 2.00

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	R	V	V	I	T	P	G	E	P	A	G	I	G	P	D	L	V	V	Q	L	A	Q	R	E	W	P	V	E	L	V	V	C	A	D	A	T	L	L	T	N	R	A	A	M	L	G	L	P	L	T	L	R	P	Y	S	P	N	S	P	A	Q	P	Q	T	A	G	T	L	T	L	L	P	V	A	L	R	A	P	V
Query Conservation
Alig confidence											.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.
Template Conservation											.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.
Template Sequence		K	K	I	A	I	F	A	G	D	.	.	G	I	G	P	E	I	V	A	A	A	R	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	L	D	A	V	D	Q	A	A	H	L	G	L	R	C	T	E	G	L	V	G	G	A	A	L	D	A	S	D	D	P	L	P	A	.	.	.	.	.	.	.	.	.
Template Known Secondary structure										S	.	.	T	T											.	.	.	.	.	.	.	.	.	.	.	.	.	.										T																			S	S	S	S			.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure											.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10			.	.	.	.	.	.	.	.	.	20	.	.															.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.						.	.	150
Predicted Secondary structure																																																																	.	.	.	.	.				.	.	.	.	.	.	.	.	.
Query SS confidence																																																																	.	.	.	.	.				.	.	.	.	.	.	.	.	.
Query Sequence		T	A	G	Q	L	A	V	E	N	G	H	Y	V	V	E	T	L	A	R	A	C	D	G	C	L	N	G	E	F	A	A	L	I	T	G	P	V	H	K	G	V	I	N	D	A	G	I	P	F	T	G	H	T	E	F	F	E	E	R	S	Q	A	K	.	.	.	.	.	K	V	V	.	.	.	.	.	.	.	.	.
Query Conservation																																																																	.	.	.	.	.				.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.																																				.	.	.	.	.				.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	S	L	Q	L	A	M	A	.	.	A	D	A	V	I	L	G	A	V	G	G	P	R	W	D	A	Y	P	P	A	K	R	P	E	Q	G	L	L	R	L	R	K	G	L	D	L	Y	A	N	L	R	P	A	Q	I	F	P	Q	L	L	D	A
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.		S										G	G	G	T	T	S		G	G	G	S													T												T	T	S	G	G	G
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.
Template SS confidence
																				57	.	.	60	.	.	.	.			.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
														151	.	.	.																		.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	M	M	L	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	E	E	L	R	V	A	L	A	T	T	H	L	P	L	R	D	I	A	D	A	I	T	P	A	L	L	H	E	V	I	A	I	L	H	H	D	L	R	T	K	F	G	I	A	E	P
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.																			.	.	.	.
Template Conservation																																															.	.	.	.	.	.	.	.	.																			.	.	.	.
Template Sequence		S	P	L	R	P	E	L	V	R	D	V	D	I	L	V	V	R	E	L	T	G	D	I	Y	F	G	Q	P	R	G	L	E	V	I	D	G	K	R	R	G	F	N	T	M	V	.	.	.	.	.	.	.	.	.	Y	D	E	D	E	I	R	R	I	A	H	V	A	F	R	A	A	Q	.	.	.	.	G	R	R	K
Template Known Secondary structure			S	S						T	T										S	S	S	T	T	T		S	S							T	T										.	.	.	.	.	.	.	.	.																			.	.	.	.	T	T	T	S
Template Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.																			.	.	.	.
Template SS confidence
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.										.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.					180	.	.	.
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.			.	.	.	.	.	.	.	260	.	.	.			.	.	.	.		.	.	270	.	.	.	.	.
Predicted Secondary structure																																																					.	.												.	.					.									.
Query SS confidence																																																					.	.												.	.					.									.
Query Sequence		R	I	L	V	C	G	L	N	P	H	A	G	E	G	G	H	M	G	T	E	E	I	D	T	I	I	P	V	L	N	E	L	R	A	Q	G	M	K	L	N	G	P	L	P	A	D	T	L	F	Q	P	.	.	K	Y	L	D	N	A	D	A	V	L	A	.	.	M	Y	H	D	.	Q	G	L	P	V	L	K	Y	.
Query Conservation																																																					.	.												.	.					.									.
Alig confidence								.	.	.	.	.										.	.																														.	.												.	.					.									.
Template Conservation								.	.	.	.	.										.	.
Template Sequence		Q	L	C	S	V	D	.	.	.	.	.	K	A	N	V	L	E	T	T	R	.	.	L	W	R	E	V	V	T	E	V	A	R	D	Y	P	D	V	R	L	S	H	M	Y	V	D	N	A	A	M	Q	L	I	R	A	P	A	Q	F	D	V	L	L	T	G	N	M	F	G	D	I	L	S	D	E	A	S	Q	L	T
Template Known Secondary structure								.	.	.	.	.		T	T	T						.	.										G	G	G		T	T	S																		G	G	G		S																			T	T
Template Predicted Secondary structure								.	.	.	.	.										.	.
Template SS confidence
		184	.	.	.	.	.						190	.	.	.	.	.	.	.	.			.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
				276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	Q	G	F	G	R	G	V	N	I	T	L	G	L	P	F	I	R	T	S	V	D	H	G	T	A	L	E	L	A	G	R	G	K	A	D	V	G	S	F	I	T	A	L	N	L	A	I	K
Query Conservation		.	.
Alig confidence		.	.										.	.
Template Conservation													.	.
Template Sequence		G	S	I	G	M	L	P	S	A	S	L	.	.	G	E	G	R	A	M	Y	E	P	I	H	G	S	A	P	D	I	A	G	Q	D	K	A	N	P	L	A	T	I	L	S	V	A	M	M	L	R
Template Known Secondary structure		S		G	G	G							.	.		S	S							S	S				G	G	G	T	T	T	T		S
Template Predicted Secondary structure													.	.
Template SS confidence
		257	.	.	260	.	.	.	.	.	.	.			.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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