Job Description P19624 Confidence 26.63% Date Thu Jan 5 11:37:23 GMT 2012 Rank 97 Aligned Residues 119 % Identity 15% Template c3oy2A_ PDB info PDB header:viral protein,transferase Chain: A: PDB Molecule:glycosyltransferase b736l; PDBTitle: crystal structure of a putative glycosyltransferase from paramecium2 bursaria chlorella virus ny2a Resolution 2.31 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.								.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																	.	.	.	.	.	.	.
Query SS confidence																																																	.	.	.	.	.	.	.
Query Sequence		A	I	L	H	H	D	L	R	T	K	F	G	I	A	E	P	R	I	L	V	C	G	L	N	P	H	A	G	E	G	G	H	M	G	T	E	E	I	D	T	I	I	P	V	L	N	E	.	.	.	.	.	.	.	L	R	A	Q	G	M	K	L	N	G	P	L	P	A	D	T	L	F	Q	P	K	Y	L	D	N	A
Query Conservation																																																	.	.	.	.	.	.	.
Alig confidence																									.	.	.	.																					.	.	.	.	.	.	.																				.	.
Template Conservation																									.	.	.	.																																															.	.
Template Sequence		I	Y	V	L	A	A	A	R	F	I	S	K	Y	P	D	A	K	V	R	F	L	C	N	.	.	.	.	S	H	H	E	S	K	F	D	L	H	S	I	A	L	R	E	L	V	A	S	G	V	D	N	V	F	T	H	L	N	K	I	M	I	N	R	T	V	L	T	D	E	R	V	D	M	.	.	M	Y	N	A	C
Template Known Secondary structure															T	T									.	.	.	.			T	T		S															T		S							T	T						S										.	.
Template Predicted Secondary structure																									.	.	.	.																																															.	.
Template SS confidence
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.					.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.			270	.	.	.	.
		259	260	.	.	.	.	.	.	.			.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.																									310	.	.
Predicted Secondary structure											.	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence											.	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	A	V	L	A	M	Y	H	D	.	.	Q	G	L	P	V	L	K	Y	Q	G	F	G	R	G	V	N	I	T	L	G	L	P	F	I	R	T	S	V	D	H	G	T	A	L	E	L	A	G	R	G	K	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	V	G
Query Conservation											.	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.										.	.	.	.	.	.	.	.										.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																						.	.	.	.	.	.	.	.										.	.
Template Sequence		D	V	I	V	N	C	S	S	G	E	G	F	G	L	C	S	A	E	G	A	.	.	.	.	.	.	.	.	V	L	G	K	P	L	I	I	S	.	.	A	V	G	G	A	D	D	Y	F	S	G	D	C	V	Y	K	I	K	P	S	A	W	I	S	V	D	D	R	D	G	I	G	G	I	E	G	I	I	D	V	D
Template Known Secondary structure		S							S			S	S									.	.	.	.	.	.	.	.	T	T	T							.	.									S		T	T	T	S												T	T	T		S	S
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.										.	.
Template SS confidence
		275	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.									.	.	.	.	.	300	.	.	.			.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.
		313	.	.	.	.	.	.	320
Predicted Secondary structure
Query SS confidence
Query Sequence		S	F	I	T	A	L	N	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	L	V	E	A	F	T	F
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		345	.	.	.	.	350	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions