Job Description P19624 Confidence 85.01% Date Thu Jan 5 11:37:23 GMT 2012 Rank 43 Aligned Residues 150 % Identity 13% Template c2pjuD_ PDB info PDB header:transcription Chain: D: PDB Molecule:propionate catabolism operon regulatory protein; PDBTitle: crystal structure of propionate catabolism operon2 regulatory protein prpr Resolution 2.10 Å

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		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	T	L	A	R	A	C	D	G	C	L	N	G	E	F	A	A	L	I	T	G	P	V	H	K	G	V	I	N	D	A	G	I	P	F	T	G	H	T	E	F	F	E	E	R	S	Q	A	K	K	V	V	M	M	L	A	T	E	E	L	R	V	A	L	A	T	T	H	L	P	L	R	D	I	A	D	A	I	T	P
Query Conservation
Alig confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	A	V	T	Y	I	R	K	K	L	A	N	E	R	C	D	A	I	I	A	A	G	S	N	G	A	Y	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	S	R	L	S	V	P	V	I	L	I	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	S	G
Template Known Secondary structure												T	T				S													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T		S	S							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		48	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.																	.	.	.	.	80	.	.	.	.	.	.	.																						.	.	90
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	L	H	E	V	I	A	I	L	H	H	D	L	R	T	K	F	G	I	A	E	P	R	I	L	V	C	G	L	N	P	H	A	G	E	G	G	H	M	G	T	E	E	I	D	T	I	I	P	V	L	N	E	L	R	A	Q	G	M	K	L	N	G	P	L	P	A	D	T	L	F	Q	P	K	Y	L	D	N	A
Query Conservation
Alig confidence															.	.	.	.	.	.	.	.										.	.	.	.	.								.	.	.								.
Template Conservation															.	.	.	.	.	.	.	.										.	.	.	.	.								.	.	.								.
Template Sequence		Y	D	V	L	Q	F	L	A	K	A	G	K	L	.	.	.	.	.	.	.	.	T	S	S	I	G	V	V	T	Y	.	.	.	.	.	Q	E	T	I	P	A	L	.	.	.	V	A	F	Q	K	T	F	.	N	L	R	L	D	Q	R	S	Y	I	T	E	E	D	A	R	G	Q	I	N	E	L	K	A	N	G	T
Template Known Secondary structure											T	T		T	.	.	.	.	.	.	.	.	T	S								.	.	.	.	.	S	S						.	.	.								.	T									S	S														T	T
Template Predicted Secondary structure															.	.	.	.	.	.	.	.										.	.	.	.	.								.	.	.								.
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.									.	.	.	.	.	.	110	.	.						.	.	.	.	.	.	.				120	.	.	.	.	.	.		.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
		259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	A	V	L	A	M	Y	H	D	Q	G	L	P	V	L	K	Y	Q	G	F	G	R	G	V	N	I	T	L	G	L	P	F	I	R	T	S	V	D	H	G	T	A	L	E	L	A	G	R	G	K	A	D	V	G	S	F	I	T	A	L	N	L	A	I	K	M	I	V	N	T	Q
Query Conservation
Alig confidence										.								.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.				.
Template Conservation										.								.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.				.
Template Sequence		E	A	V	V	G	A	G	L	.	I	T	D	L	A	E	E	.	.	.	.	.	.	.	.	.	.	.	A	G	M	T	G	I	F	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	S	A	.	A	T	V	R	Q	A	F	S	D	A	L	D	M	T	R	M	S	L
Template Known Secondary structure							S			.								.	.	.	.	.	.	.	.	.	.	.	T	T	S					S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S			.
Template Predicted Secondary structure										.								.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.				.
Template SS confidence
		154	.	.	.	.	.	160	.		.	.	.	.	.	.	.												.	170	.	.	.	.	.	.															.	.	.		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions