Job Description P19624 Confidence 100.00% Date Thu Jan 5 11:37:23 GMT 2012 Rank 4 Aligned Residues 323 % Identity 60% Template c1yxoB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:4-hydroxythreonine-4-phosphate dehydrogenase 1; PDBTitle: crystal structure of pyridoxal phosphate biosynthetic protein pdxa2 pa0593 Resolution 2.01 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.		.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure																																																																	.
Query SS confidence																																																																	.
Query Sequence		R	V	V	I	T	P	G	E	P	A	G	I	G	P	D	L	V	V	Q	L	A	Q	R	E	W	P	V	E	L	V	V	C	A	D	A	T	L	L	T	N	R	A	A	M	L	G	L	P	L	T	L	R	P	Y	S	P	N	S	P	A	Q	P	Q	.	T	A	G	T	L	T	L	L	P	V	A	L	R	A	P	V
Query Conservation																																																																	.
Alig confidence																																																																	.
Template Conservation
Template Sequence		R	F	A	L	T	P	G	E	P	A	G	I	G	P	D	L	C	L	L	L	A	R	S	A	Q	P	H	P	L	I	A	I	A	S	R	T	L	L	Q	E	R	A	G	Q	L	G	L	A	I	D	L	K	D	V	S	P	A	A	W	P	E	R	P	A	K	A	G	Q	L	Y	V	W	D	T	P	L	A	A	P	V
Template Known Secondary structure									S	T	T	S	S								G	G	G	S			S	S																			T									B	T	T	B				S				T	T										S	S
Template Predicted Secondary structure
Template SS confidence
		1004	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	A	G	Q	L	A	V	E	N	G	H	Y	V	V	E	T	L	A	R	A	C	D	G	C	L	N	G	E	F	A	A	L	I	T	G	P	V	H	K	G	V	I	N	D	A	G	I	P	F	T	G	H	T	E	F	F	E	E	R	S	Q	A	K	K	V	V	M	M	L	A	T	E	E	L	R	V	A	L	A	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	P	G	Q	L	D	R	A	N	A	A	Y	V	L	E	T	L	T	R	A	G	Q	G	C	L	D	G	H	F	A	G	X	I	T	A	P	V	H	K	G	V	I	N	E	A	G	I	P	F	S	G	H	T	E	F	L	A	D	L	T	H	T	A	Q	V	V	X	X	L	A	T	R	G	L	R	V	A	L	A	T
Template Known Secondary structure		B	T	T	B			G	G	G																		T	S		S															T	T				S										T	T		S									T	T						S	S
Template Predicted Secondary structure
Template SS confidence
		1084	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	H	L	P	L	R	D	I	A	D	A	I	T	P	A	L	L	H	E	V	I	A	I	L	H	H	D	L	R	T	K	F	G	I	A	E	P	R	I	L	V	C	G	L	N	P	H	A	G	E	G	G	H	M	G	T	E	E	I	D	T	I	I	P	V	L	N	E	L	R	A	Q	G	M	K	L	N	G	P	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	H	L	P	L	R	E	V	A	D	A	I	S	D	E	R	L	T	R	V	A	R	I	L	H	A	D	L	R	D	K	F	G	I	A	H	P	R	I	L	V	C	G	L	N	P	H	A	G	E	G	G	H	L	G	R	E	E	I	E	V	I	E	P	C	L	E	R	L	R	G	E	G	L	D	L	I	G	P	L
Template Known Secondary structure			S	S																												T	S			S	S								S	S	G	G	G	G	G	G	G	T	S		S					T											T	T
Template Predicted Secondary structure
Template SS confidence
		1164	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	A	D	T	L	F	Q	P	K	Y	L	D	N	A	D	A	V	L	A	M	Y	H	D	Q	G	L	P	V	L	K	Y	Q	G	F	G	R	G	V	N	I	T	L	G	L	P	F	I	R	T	S	V	D	H	G	T	A	L	E	L	A	G	R	G	K	A	D	V	G	S	F	I	T	A	L	N	L	A	I	K	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	A	D	T	L	F	T	P	K	H	L	E	H	C	D	A	V	L	A	X	Y	H	D	Q	G	L	P	V	L	K	Y	K	G	F	G	A	A	V	N	V	T	L	G	L	P	I	I	R	T	S	V	D	H	G	T	A	L	D	L	A	G	S	G	R	I	D	S	G	S	L	Q	V	A	L	E	T	A	Y	Q	X
Template Known Secondary structure							S	S					T	T		S					S	S												T	T	T								T	S	S	S						S	S				G	G	G	T	T	S
Template Predicted Secondary structure
Template SS confidence
		1244	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.	.	.	.	.	.	1300	.	.	.	.	.	.	.	.	.	1310	.	.	.	.	.	.	.	.	.	1320	.	.	.
		325	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	V	N	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	A	S	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		1324	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions