Job Description Q46939 Confidence 100.00% Date Thu Jan 5 12:35:58 GMT 2012 Rank 12 Aligned Residues 347 % Identity 39% Template c3svkB_ PDB info PDB header:transferase Chain: B: PDB Molecule:acetyl-coa acetyltransferase; PDBTitle: crystal structure of acetyl-coa acetyltransferase from mycobacterium2 avium Resolution 2.20 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.		.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40		.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																			.																							.
Query SS confidence																			.																							.
Query Sequence		K	D	V	V	I	V	G	A	L	R	T	P	I	G	C	F	R	.	G	A	L	A	G	H	S	A	V	E	L	G	S	L	V	V	K	A	L	I	E	R	.	T	G	V	P	A	Y	A	V	D	E	V	I	L	G	Q	V	L	T	A	G	A	G	Q	N	P	A	R	Q	S	A	I	K	G	G	L	P	N	S	V
Query Conservation																			.																							.
Alig confidence																			.																							.																.	.	.	.	.	.	.
Template Conservation																																																										.	.	.	.	.	.	.
Template Sequence		E	E	A	F	I	Y	E	A	I	R	T	P	R	G	K	Q	K	N	G	S	L	T	E	V	K	P	L	N	L	V	V	G	L	V	D	E	L	R	R	R	Y	P	D	L	D	E	T	L	I	S	D	M	I	L	G	V	.	.	.	.	.	.	.	V	D	I	A	R	T	A	V	L	A	A	G	L	P	E	T	T
Template Known Secondary structure																	S	S	S	S	T	T	T	T	S																	S	T	T			G	G	G									.	.	.	.	.	.	.											T	T			T	T
Template Predicted Secondary structure																																																										.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.								.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	A	I	T	I	N	D	V	C	G	S	G	L	K	A	L	H	L	A	T	Q	A	I	Q	C	G	E	A	D	I	V	I	A	G	G	Q	E	N	M	S	R	A	P	H	V	L	T	D	S	R	T	G	A	Q	L	G	N	S	Q	L	V	D	S	L	V	H	D	G	L	W	D	A	F	N	D	Y	H	I	G	V
Query Conservation
Alig confidence		.	.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	G	G	V	Q	L	N	S	G	L	E	A	V	N	T	A	A	Q	K	V	R	S	G	W	D	D	L	V	L	A	G	G	V	E	S	M	W	A	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	P	E	T	N	Y	R	I	G	F	V	P	Q	G	I
Template Known Secondary structure		.	.	.	.																						T	S		S													B	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T	T			B
Template Predicted Secondary structure		.	.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
						84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.																								.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.											.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																			.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																			.	.	.	.	.	.	.	.	.	.
Query Sequence		T	A	E	N	L	A	R	E	Y	G	I	S	R	Q	L	Q	D	A	Y	A	L	S	S	Q	Q	K	A	R	A	A	I	D	A	G	R	F	K	D	E	I	V	P	V	M	T	Q	S	N	G	.	.	.	.	.	.	.	.	.	.	Q	T	L	V	V	D	T	D	E	Q	P	R	T	D	A	S	A	E	G	L	A
Query Conservation																																																			.	.	.	.	.	.	.	.	.	.
Alig confidence																																																			.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	A	D	L	I	A	T	L	E	G	F	S	R	E	D	V	D	A	Y	A	L	R	S	Q	Q	K	A	A	A	A	W	S	G	G	Y	F	A	K	S	V	V	P	V	R	D	Q	N	G	L	V	I	L	D	H	D	E	H	M	R	P	D	T	T	M	E	G	L	A	K	L	K	T	A	F	D	L	Q	K	Y	H
Template Known Secondary structure											T																							T	T	T	T	T	T	T	B						T	T							S		T	T			T	T								T	S		B	S					S	S	T
Template Predicted Secondary structure
Template SS confidence
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	N	P	S	F	D	S	L	G	S	V	T	A	G	N	A	S	S	I	N	D	G	A	A	A	V	M	M	M	S	E	A	K	A	R	A	L	N	L	P	V	L	A	R	I	R	A	F	A	S	V	G	V	D	P	A	L	M	G	I	A	P	V	Y	A	T	R	R	C	L	E	R	V	G	W	Q	L	A	E
Query Conservation
Alig confidence										.	.	.																																										.	.	.	.	.	.
Template Conservation										.	.	.																																										.	.	.	.	.	.
Template Sequence		W	V	E	K	I	N	H	V	.	.	.	H	T	G	G	N	S	S	G	I	V	D	G	A	A	L	V	L	V	G	S	E	K	A	G	K	S	Q	G	L	T	P	R	A	R	I	V	A	T	A	T	S	.	.	.	.	.	.	M	L	T	G	P	T	P	A	T	R	K	V	L	D	R	A	G	L	T	I	D	D
Template Known Secondary structure		T			S					.	.	.		B	T	T	T	B			B																		T	T														.	.	.	.	.	.				T												T	T			G	G	G
Template Predicted Secondary structure										.	.	.																																										.	.	.	.	.	.
Template SS confidence
		244	.	.	.	.	.	250	.				.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.							.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	D	L	I	E	A	N	E	A	F	A	A	Q	A	L	S	V	G	K	M	L	E	W	D	E	R	R	V	N	V	N	G	G	A	I	A	L	G	H	P	I	G	A	S	G	C	R	I	L	V	S	L	V	H	E	M	V	K	R	N	A	R	K	G	L	A	T	L	C	I	G	G	G	Q	G	V	A	L	T	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	D	L	F	E	L	N	E	A	F	A	S	V	V	L	K	F	Q	K	D	L	N	I	P	D	E	K	L	N	V	N	G	G	A	I	A	M	G	H	P	L	G	A	T	G	A	M	I	T	G	T	M	V	D	E	L	E	R	R	N	A	R	R	A	L	I	T	L	C	I	G	G	G	M	G	V	A	T	I	I
Template Known Secondary structure			S							S	B												T			G	G	G	B	S	T	T								B		G	G	G																	T											S	S	S
Template Predicted Secondary structure
Template SS confidence
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400
		390	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		401	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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