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Job DescriptionQ46939
Confidence99.96%DateThu Jan 5 12:35:58 GMT 2012
Rank49Aligned Residues255
% Identity20%Templatec3il3A_
PDB info PDB header:transferaseChain: A: PDB Molecule:3-oxoacyl-[acyl-carrier-protein] synthase 3; PDBTitle: structure of haemophilus influenzae fabh
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   11........20.........30.........40.........50.........60.........70.........80.........90
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Query Sequence  RTPIGCFRGALAGHSAVELGSLVVKALIERTGVPAYAVDEVILGQVLTAGAGQNPARQSAIKGGLPNSVSAITINDVCGS
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Template Sequence  RSGIRERRIAAEDETVATMGFEAAKNAIEAAQINPQDIELIIVATTSHSHAYPSAACQVQGLLNI. DDAISFDLA. AATG
Template Known Secondary structure  T





TT




GGG


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S
SSS
TT
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   36...40.........50.........60.........70.........80.........90.........100 ......... 110...
 
   91........100.........110.........120.........130.........140.........150.........160.........170
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Query Sequence  GLKALHLATQAIQCGEADIVIAGGQENMSRAPHVLTDSRTGAQLGNSQLVDSLVHDGLWDAFNDYHIGVTAENLAREYGI
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Template Sequence  FVYALSVADQFIRAGKVKKALVIGSDLNSRKLDETDRS. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  TTS
SGGGS

TT
TT..........................................
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   115....120.........130.........140.........150..
 
   171........180.........190.........200.........210.........220.........230.........240.........250
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Query Sequence  SRQLQDAYALSSQQKARAAIDAGRFKDEIVPVMTQSNGQTLVVDTDEQPRTDASAEGLARLNPSFDSLGSVTAGNASSIN
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . TVVLFG
Template Known Secondary structure  ..........................................................................TTTTB
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   153.....
 
   251........260.........270.........280.........290. ........300......
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Query Sequence  DGAAAVMMMSEAKARALNLPVLARIRAFASVGVDPALMGIA. . . . . . . . . . . . . . . . . . . . . . . . PVYATRRCLERVGWQ
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Template Sequence  DGAGAVILEAS. . . . . EQEGIISTHLHASADKNNALVLAQPERGIEKSGYIEMQGNETFKLAVRELSNVVEETLLANNLD
Template Known Secondary structure  .....SS





S
S




TT
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S


TTT

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   159160......... 170.........180.........190.........200.........210.........220.........230...
 
   307..310.........320.........330.........340.........350.........360.........370.........380......
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Query Sequence  LAEVDLIEANEAFAAQALSVGKMLEWDERRVNVNGGAIALGHPIGASGCRILVSLVHEMVKRNARKGLATLCIGGGQGVA
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Template Sequence  KKDLDWLVPHQANLRIITATAKKLEMDMSQVVVT. . LDKYANNSAATVPVALDEAIRDGRIQRGQLLLLEAFGGGWTWGS
Template Known Secondary structure  TTT



S
TT

GGGB


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B
GGGTTSS
TT
TTT
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   234.....240.........250.........260....... ..270.........280.........290.........300.........310.
 
   387..390
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Query Sequence  LTIE
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Template Sequence  ALVR
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   312...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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