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Job DescriptionQ46939
Confidence99.92%DateThu Jan 5 12:35:58 GMT 2012
Rank70Aligned Residues258
% Identity14%Templatec3euoB_
PDB info PDB header:transferaseChain: B: PDB Molecule:type iii pentaketide synthase; PDBTitle: crystal structure of a fungal type iii polyketide synthase,2 oras
Resolution1.75 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   25....30.........40.........50.........60.........70.........80.........90.........100....
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Query Sequence  SAVELGSLVVKALIERTGVPAYAVDEVILGQVLTAGAGQNPARQSAIKGGLPNSVSAITINDVCGSGLKALHLATQAIQC
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Template Sequence  DGVPLAVEASRKAMAEARLVPAQITHMVSTTC. TDSANPGYDHYVAKELGLSDRLEKVLLHGIGSGGLAALRTAANLCLG
Template Known Secondary structure  TTT

GGG


S.S


SS
T

TT

S


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   8990.........100.........110.........120 .........130.........140.........150.........160.......
 
   105....110.........120.........130.........140.........150.........160.........170.........180
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Query Sequence  . . . . GEADIVIAGGQENMSRAPHVLTDSRTGAQLGNSQLVDSLVHDGLWDAFNDYHIGVTAENLAREYGISRQLQDAYAL
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Template Sequence  HTARGKPARILVLALEVSTTMVRSELESIDALQETRI. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  TT




GGGT



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   169170.........180.........190.........200.....
 
   181........190.........200.........210.........220.........230.........240.........250.........260
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Query Sequence  SSQQKARAAIDAGRFKDEIVPVMTQSNGQTLVVDTDEQPRTDASAEGLARLNPSFDSLGSVTAGNASSINDGAAAVMMMS
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . GIALFSDCASAVILSN
Template Known Secondary structure  ................................................................B


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   206...210.........220.
 
   261........270.........280........ .290.........300.........310.
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Query Sequence  EAKARALNLPVLARIRAFASVGVDPALM. . . . . . . . . . . . . . . . . . . . . . . . . . . . . GIAPVYATRRCLERVGWQLAEVD
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Template Conservation                                      
                               
           
Template Sequence  GIGEAPGKPAIYDLLGWENRVIPDSEHDLGFDVDPMGWKVVLSPRVPVLAKASLQPTYADLLSSLQDQLPSSYQKPADFD
Template Known Secondary structure  STT
SSS


S
TT
GGGTT
TTTTTTTS
TTS
SGGGS
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   222.......230.........240.........250.........260.........270.........280.........290.........300.
 
   312.......320.........330.........340..... ....350.........360....... ..370.........380....
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Query Sequence  LIEANEAFAAQALSVGKMLEWDERRVNVNGGAIA. LGHPIGASGCRILVSLVHEMVK. . . . . . RNARKGLATLCIGGGQG
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Template Sequence  WAM. HPGGATILSGAESAMGLTPEHMRASYDRYINHGNSSSATIFSVLNRLREKDMDALAPGGKVKEYVVGCAFGPGINV
Template Known Secondary structure  .

SST

GGGG
B
GGGTSTTSGGG


STTT
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   302.. .....310.........320.........330.........340.........350.........360.........370.........380
 
   385....390.
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Query Sequence  VALTIER
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Template Sequence  EMCMLKR
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   381......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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