Job Description Q46939 Confidence 99.94% Date Thu Jan 5 12:35:58 GMT 2012 Rank 68 Aligned Residues 246 % Identity 25% Template c2x3eA_ PDB info PDB header:transferase Chain: A: PDB Molecule:3-oxoacyl-[acyl-carrier-protein] synthase 3; PDBTitle: crystal structure of 3-oxoacyl-(acyl carrier protein)2 synthase iii, fabh from pseudomonas aeruginosa pao1 Resolution 1.81 Å

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		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	H	S	A	V	E	L	G	S	L	V	V	K	A	L	I	E	R	T	G	V	P	A	Y	A	V	D	E	V	I	L	G	Q	V	L	T	A	G	A	G	Q	N	P	A	R	Q	S	A	I	K	G	G	L	P	N	S	V	S	A	I	T	I	N	D	V	C	G	S	G	L	K	A	L	H	L	A	T	Q	A
Query Conservation
Alig confidence																									.	.																															.
Template Conservation																									.	.																															.
Template Sequence		G	D	L	G	S	G	D	L	A	L	R	A	A	S	A	A	L	A	S	A	G	L	E	.	.	R	V	D	A	V	V	L	A	T	S	T	G	D	F	C	C	P	A	T	A	P	R	V	A	A	R	L	G	L	V	.	G	A	L	A	F	D	L	S	A	A	A	T	G	F	V	Y	G	L	A	S	V	G	S	L
Template Known Secondary structure		T	T																			T		S	.	.			S							S	S		S		S	S	S		S								T	T		T	.	T	S								G	G	G
Template Predicted Secondary structure																									.	.																															.
Template SS confidence
		48	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70			.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100		.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	Q	C	G	E	A	D	I	V	I	A	G	G	Q	E	N	M	S	R	A	P	H	V	L	T	D	S	R	T	G	A	Q	L	G	N	S	Q	L	V	D	S	L	V	H	D	G	L	W	D	A	F	N	D	Y	H	I	G	V	T	A	E	N	L	A	R	E	Y	G	I	S	R	Q	L	Q	D	A	Y	A	L	S
Query Conservation
Alig confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	S	A	G	L	A	D	S	A	L	L	V	G	V	D	T	F	S	H	T	L	D	P	A	D	R	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure				T	T	S		S										G	G	G	G	S		T	T				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	Q	Q	K	A	R	A	A	I	D	A	G	R	F	K	D	E	I	V	P	V	M	T	Q	S	N	G	Q	T	L	V	V	D	T	D	E	Q	P	R	T	D	A	S	A	E	G	L	A	R	L	N	P	S	F	D	S	L	G	S	V	T	A	G	N	A	S	S	I	N	D	G	A	A	A	V	M	M	M	S	E
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	R	A	L	F	G	D	G	A	G	A	V	V	L	R	A	G
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					B
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																																																																	152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.																															.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	K	A	R	A	L	N	L	P	V	L	A	R	I	R	A	F	A	S	V	G	V	D	P	A	L	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	I	A	P	V	Y	A	T	R	R	C	L	E	R	V	G	W	Q	L	A	E	V	D
Query Conservation																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.	.	.	.
Template Sequence		D	A	E	E	E	G	A	.	.	.	.	L	L	A	F	D	L	G	S	D	G	H	Q	F	D	L	L	M	T	P	A	V	S	R	A	E	R	S	S	G	Q	A	S	N	Y	F	R	M	D	G	K	A	V	F	G	Q	A	V	T	Q	M	S	D	S	V	R	R	V	L	D	R	V	G	W	Q	A	S	D	L	H
Template Known Secondary structure			T	T	S	T	T	B	.	.	.	.										G	G	G	T	T	S														T																																	T			G	G	G		S
Template Predicted Secondary structure									.	.	.	.
Template SS confidence
		169	170	.	.	.	.	.					.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
		312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	I	E	A	N	E	A	F	A	A	Q	A	L	S	V	G	K	M	L	E	W	D	E	R	R	V	N	V	N	G	G	A	I	A	L	G	H	P	I	G	A	S	G	C	R	I	L	V	S	L	V	H	E	M	V	K	R	N	A	R	K	G	L	A	T	L	C	I	G	G	G	Q	G	V	A	L	T	I	E	R
Query Conservation
Alig confidence																															.	.																																																.
Template Conservation																															.	.																																																.
Template Sequence		H	L	V	P	H	Q	A	N	T	R	I	L	A	A	V	A	D	Q	L	D	L	P	V	E	R	V	V	S	N	.	.	I	A	E	V	G	N	T	V	A	A	S	I	P	L	A	L	A	H	G	L	R	Q	G	I	L	R	D	G	G	N	M	V	L	T	G	F	G	A	G	L	T	W	G	S	V	A	L	.	R
Template Known Secondary structure																					T			G	G	G	B				.	.						B		G	G	G												T	T		S		T	T										T	T	T								.
Template Predicted Secondary structure																															.	.																																																.
Template SS confidence
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.			.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320		.
		392	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		W	P
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		322	.

No model constructed - rank, confidence too low

---

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions