Job Description Q46939 Confidence 100.00% Date Thu Jan 5 12:35:58 GMT 2012 Rank 4 Aligned Residues 386 % Identity 44% Template c2ibyD_ PDB info PDB header:transferase Chain: D: PDB Molecule:acetyl-coa acetyltransferase; PDBTitle: crystallographic and kinetic studies of human mitochondrial2 acetoacetyl-coa thiolase (t2): the importance of potassium and3 chloride for its structure and function Resolution 1.85 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	K	D	V	V	I	V	G	A	L	R	T	P	I	G	C	F	R	G	A	L	A	G	H	S	A	V	E	L	G	S	L	V	V	K	A	L	I	E	R	T	G	V	P	A	Y	A	V	D	E	V	I	L	G	Q	V	L	T	A	G	A	G	Q	N	P	A	R	Q	S	A	I	K	G	G	L	P	N	S	V	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	K	E	V	V	I	V	S	A	T	R	T	P	I	G	S	F	L	G	S	L	S	L	L	P	A	T	K	L	G	S	I	A	I	Q	G	A	I	E	K	A	G	I	P	K	E	E	V	K	E	A	Y	M	G	N	V	L	Q	G	G	E	G	Q	A	P	T	R	Q	A	V	L	G	A	G	L	P	I	S	T	P
Template Known Secondary structure																		T	T	S	T	T	T	T	S																		T			G	G	G									S			T	T	S		S										T	T			T	T
Template Predicted Secondary structure
Template SS confidence
		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		A	I	T	I	N	D	V	C	G	S	G	L	K	A	L	H	L	A	T	Q	A	I	Q	C	G	E	A	D	I	V	I	A	G	G	Q	E	N	M	S	R	A	P	H	V	L	T	D	S	R	T	G	A	Q	L	G	N	S	Q	L	V	D	S	L	V	H	D	G	L	W	D	A	F	N	D	Y	H	I	G	V	T
Query Conservation
Alig confidence							.																																											.	.
Template Conservation							.																																											.	.
Template Sequence		C	T	T	I	N	.	K	V	A	S	G	M	K	A	I	M	M	A	S	Q	S	L	M	C	G	H	Q	D	V	M	V	A	G	G	M	E	S	M	S	N	V	P	Y	V	M	N	R	G	.	.	S	T	P	Y	G	G	V	K	L	E	D	L	I	V	K	D	G	L	T	D	V	Y	N	K	I	H	M	G	S	C
Template Known Secondary structure							.																		T	T	S		S										G	G	G							S	S	.	.				T	T												T	T	B		T	T	T		S	B
Template Predicted Secondary structure							.																																											.	.
Template SS confidence
		119	120	.	.	.		.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.			.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.		.	.
Predicted Secondary structure																																																																															.
Query SS confidence																																																																															.
Query Sequence		A	E	N	L	A	R	E	Y	G	I	S	R	Q	L	Q	D	A	Y	A	L	S	S	Q	Q	K	A	R	A	A	I	D	A	G	R	F	K	D	E	I	V	P	V	M	T	Q	S	N	G	Q	T	L	V	V	D	T	D	E	Q	P	R	T	D	A	S	A	E	G	L	A	R	L	N	P	S	F	D	S	.	L	G
Query Conservation																																																																															.
Alig confidence																																																																															.
Template Conservation
Template Sequence		A	E	N	T	A	K	K	L	N	I	A	R	N	E	Q	D	A	Y	A	I	N	S	Y	T	R	S	K	A	A	W	E	A	G	K	F	G	N	E	V	I	P	V	T	V	T	V	K	G	Q	P	D	V	V	V	K	E	D	E	E	Y	K	R	V	D	F	S	K	V	P	K	L	K	T	V	F	Q	K	E	N	G
Template Known Secondary structure									T	T																								T	T	T	T	T	T	B								T	T	S							S		S	G	G	G	S			T	T	T	G	G	G				T	T		S	T	T
Template Predicted Secondary structure
Template SS confidence
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	V	T	A	G	N	A	S	S	I	N	D	G	A	A	A	V	M	M	M	S	E	A	K	A	R	A	L	N	L	P	V	L	A	R	I	R	A	F	A	S	V	G	V	D	P	A	L	M	G	I	A	P	V	Y	A	T	R	R	C	L	E	R	V	G	W	Q	L	A	E	V	D	L	I	E	A	N	E	A	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	V	T	A	A	N	A	S	T	L	N	D	G	A	A	A	L	V	L	M	T	A	D	A	A	K	R	L	N	V	T	P	L	A	R	I	V	A	F	A	D	A	A	V	E	P	I	D	F	P	I	A	P	V	Y	A	A	S	M	V	L	K	D	V	G	L	K	K	E	D	I	A	M	W	E	V	N	E	A	F
Template Known Secondary structure					T	T	T	B																					T	T																	G	G	G	G	G	G														T			G	G	G									S	B
Template Predicted Secondary structure
Template SS confidence
		277	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	Q	A	L	S	V	G	K	M	L	E	W	D	E	R	R	V	N	V	N	G	G	A	I	A	L	G	H	P	I	G	A	S	G	C	R	I	L	V	S	L	V	H	E	M	V	K	R	N	A	R	K	G	L	A	T	L	C	I	G	G	G	Q	G	V	A	L	T	I	E	R
Query Conservation
Alig confidence																																																	.	.
Template Conservation																																																	.	.
Template Sequence		S	L	V	V	L	A	N	I	K	M	L	E	I	D	P	Q	K	V	N	I	N	G	G	A	V	S	L	G	H	P	I	G	M	S	G	A	R	I	V	G	H	L	T	H	A	L	K	.	.	Q	G	E	Y	G	L	A	S	I	C	N	G	G	G	G	A	S	A	M	L	I	Q	K
Template Known Secondary structure													T			G	G	G	B	S	T	T																											.	.	T	T										T	T	T
Template Predicted Secondary structure																																																	.	.
Template SS confidence
		357	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.			.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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