Job Description Q46939 Confidence 99.93% Date Thu Jan 5 12:35:58 GMT 2012 Rank 69 Aligned Residues 248 % Identity 14% Template c2h84A_ PDB info PDB header:biosynthetic protein, transferase Chain: A: PDB Molecule:steely1; PDBTitle: crystal structure of the c-terminal type iii polyketide synthase (pks2 iii) domain of 'steely1' (a type i/iii pks hybrid from dictyostelium) Resolution 2.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.		.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure																																																															.
Query SS confidence																																																															.
Query Sequence		A	V	E	L	G	S	L	V	V	K	A	L	I	E	R	T	G	V	P	A	Y	A	V	D	E	V	I	L	G	Q	V	L	T	A	G	A	G	Q	N	P	A	R	Q	S	A	I	K	G	G	L	P	N	S	V	S	A	I	T	I	N	D	.	V	C	G	S	G	L	K	A	L	H	L	A	T	Q	A	I	Q	C
Query Conservation																																																															.
Alig confidence																																		.																													.
Template Conservation																																		.
Template Sequence		V	P	D	L	A	Q	Q	A	C	L	R	A	L	K	D	W	G	G	D	K	G	D	I	T	H	I	V	S	V	T	S	T	.	G	I	I	I	P	D	V	N	F	K	L	I	D	L	L	G	L	N	K	D	V	E	R	V	S	L	N	L	M	G	C	L	A	G	L	S	S	L	R	T	A	A	S	L	A	K	A
Template Known Secondary structure																			S		G	G	G									S	S	.				S	S											T			T	T								S		G	G	G														T	T
Template Predicted Secondary structure																																		.
Template SS confidence
		2868	.	2870	.	.	.	.	.	.	.	.	.	2880	.	.	.	.	.	.	.	.	.	2890	.	.	.	.	.	.	.	.	.		2900	.	.	.	.	.	.	.	.	.	2910	.	.	.	.	.	.	.	.	.	2920	.	.	.	.	.	.	.	.	.	2930	.	.	.	.	.	.	.	.	.	2940	.	.	.	.	.	.
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	E	A	D	I	V	I	A	G	G	Q	E	N	M	S	R	A	P	H	V	L	T	D	S	R	T	G	A	Q	L	G	N	S	Q	L	V	D	S	L	V	H	D	G	L	W	D	A	F	N	D	Y	H	I	G	V	T	A	E	N	L	A	R	E	Y	G	I	S	R	Q	L	Q	D	A	Y	A	L	S	S	Q	Q
Query Conservation
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	P	R	N	R	I	L	V	V	C	T	E	V	C	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure			T	T												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2947	.	.	2950	.	.	.	.	.	.	.	.	.	2960
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	A	R	A	A	I	D	A	G	R	F	K	D	E	I	V	P	V	M	T	Q	S	N	G	Q	T	L	V	V	D	T	D	E	Q	P	R	T	D	A	S	A	E	G	L	A	R	L	N	P	S	F	D	S	L	G	S	V	T	A	G	N	A	S	S	I	N	D	G	A	A	A	V	M	M	M	S	E	A	K	A
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	L	H	F	S	N	T	D	G	G	D	Q	M	V	A	S	S	I	F	A	D	G	S	A	A	Y	I	I	G	C	N	P	R	I
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	G				S	S	S										B											S	S			T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																																																2961	.	.	.	.	.	.	.	.	2970	.	.	.	.	.	.	.	.	.	2980	.	.	.	.	.	.	.	.	.	2990	.	.	.	.
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.																								290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310						.	.	.	.	.	.
Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.
Query SS confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.
Query Sequence		R	A	L	N	L	P	V	L	A	R	I	R	A	F	A	S	V	G	V	D	P	A	L	M	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	A	P	V	Y	A	T	R	R	C	L	E	R	V	G	W	Q	L	A	E	V	.	.	.	.	.	D	L	I	E	A	N
Query Conservation																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.
Alig confidence							.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.
Template Conservation							.	.	.
Template Sequence		E	E	T	P	L	.	.	.	Y	E	V	M	C	S	I	N	R	S	F	P	N	T	E	N	A	M	V	W	D	L	E	K	E	G	W	N	L	G	L	D	A	S	I	P	I	V	I	G	S	G	I	E	A	F	V	D	T	L	L	D	K	A	K	L	Q	T	S	T	A	I	S	A	K	D	C	E	F	L	I	H
Template Known Secondary structure		T					.	.	.												S	S		T	T	S							T	T								T	T																					T	T	T	S		S				S	S	S	S
Template Predicted Secondary structure							.	.	.
Template SS confidence
		2995	.	.	.	.				3000	.	.	.	.	.	.	.	.	.	3010	.	.	.	.	.	.	.	.	.	3020	.	.	.	.	.	.	.	.	.	3030	.	.	.	.	.	.	.	.	.	3040	.	.	.	.	.	.	.	.	.	3050	.	.	.	.	.	.	.	.	.	3060	.	.	.	.	.	.	.	.	.	3070	.
		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.		.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.
Predicted Secondary structure																															.
Query SS confidence																															.
Query Sequence		E	A	F	A	A	Q	A	L	S	V	G	K	M	L	E	W	D	E	R	R	V	N	V	N	G	G	A	I	A	.	L	G	H	P	I	G	A	S	G	C	R	I	L	V	S	L	V	H	E	M	V	K	R	N	A	R	K	G	L	A	T	L	C	I	G	G	G	Q	G	V	A	L	T	I	E	R
Query Conservation																															.
Alig confidence																															.																					.	.
Template Conservation																																																				.	.
Template Sequence		T	G	G	K	S	I	L	M	N	I	E	N	S	L	G	I	D	P	K	Q	T	K	N	T	W	D	V	Y	H	A	Y	G	N	M	S	S	A	S	V	I	F	V	M	D	H	A	R	K	S	K	.	.	S	L	P	T	Y	S	I	S	L	A	F	G	P	G	L	A	F	E	G	C	F	L	K	N
Template Known Secondary structure															T	T			G	G	G	G												B		T	T												T		S	.	.				S									T	T	T
Template Predicted Secondary structure																																																				.	.
Template SS confidence
		3072	.	.	.	.	.	.	.	3080	.	.	.	.	.	.	.	.	.	3090	.	.	.	.	.	.	.	.	.	3100	.	.	.	.	.	.	.	.	.	3110	.	.	.	.	.	.	.	.	.	3120	.			.	.	.	.	.	.	.	.	3130	.	.	.	.	.	.	.	.	.	3140	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions