Job Description Q46939 Confidence 99.97% Date Thu Jan 5 12:35:58 GMT 2012 Rank 41 Aligned Residues 269 % Identity 20% Template c1tqyD_ PDB info PDB header:transferase Chain: D: PDB Molecule:actinorhodin polyketide putative beta-ketoacyl synthase 2; PDBTitle: the actinorhodin ketosynthase/chain length factor Resolution 2.00 Å

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		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.					50	.	.	.	.	.	.	.	.																											.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																										.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	V	E	L	G	S	L	V	V	K	A	L	I	E	R	T	G	V	P	A	Y	A	V	D	.	.	.	.	E	V	I	L	G	Q	V	L	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	G	A	G	Q	N	P	A	R	Q	S	A	I	K	G	G	L
Query Conservation																										.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																										.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	T	R	L	A	L	T	A	A	D	W	A	L	Q	D	A	K	A	D	P	E	S	L	T	D	Y	D	M	G	V	V	T	A	N	A	C	G	G	F	D	F	T	H	R	E	F	R	K	L	W	S	E	G	P	K	S	V	S	V	Y	E	S	F	A	W	F	Y	A	V	N	T	G	Q	I	S	I	R	H	G	M
Template Known Secondary structure																	T	T			G	G	G	S		G	G	G								S	S		S														T		G	G	G	S		T	T					S	S	T	T											T
Template Predicted Secondary structure
Template SS confidence
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	N	S	V	S	A	I	T	I	N	D	V	C	G	S	G	L	K	A	L	H	L	A	T	Q	A	I	Q	C	G	E	A	D	I	V	I	A	G	G	Q	E	N	M	S	R	A	P	H	V	L	T	D	S	R	T	G	A	Q	L	G	N	S	Q	L	V	D	S	L	V	H	D	G	L	W	D	A	F	N	D	Y
Query Conservation
Alig confidence				.	.																											.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation				.	.																											.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	G	.	.	P	S	S	A	L	V	A	E	Q	A	G	G	L	D	A	L	G	H	A	R	R	T	I	R	R	G	.	T	P	L	V	V	S	G	G	V	D	S	A	L	D	P	W	G	W	V	S	Q	I	A	S	G	R	I	S	T	A	T	D	P	D	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure			S	.	.	S							G	G	G															T	T	.		S												S									T	T	S		B						G	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure				.	.																											.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		151	.			.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.		.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	I	G	V	T	A	E	N	L	A	R	E	Y	G	I	S	R	Q	L	Q	D	A	Y	A	L	S	S	Q	Q	K	A	R	A	A	I	D	A	G	R	F	K	D	E	I	V	P	V	M	T	Q	S	N	G	Q	T	L	V	V	D	T	D	E	Q	P	R	T	D	A	S	A	E	G	L	A	R	L	N	P	S	F
Query Conservation
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.		270	.	.	.	.	.	.	.	.	.	280	.	.	.			.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
Predicted Secondary structure																																				.															.	.
Query SS confidence																																				.															.	.
Query Sequence		D	S	L	G	S	V	T	A	G	N	A	S	S	I	N	D	G	A	A	A	V	M	M	M	S	E	A	K	A	R	A	L	N	L	.	P	V	L	A	R	I	R	A	F	A	S	V	G	V	.	.	D	P	A	L	M	G	I	A	P	V	Y	A	T	R	R	C	L	E	R	V	G	W	Q	L	A	E	V	D	L
Query Conservation																																				.															.	.
Alig confidence																																				.															.	.
Template Conservation
Template Sequence		A	Y	L	P	F	D	E	R	A	A	G	Y	V	P	G	E	G	G	A	I	L	V	L	E	D	S	A	A	A	E	A	R	G	R	H	D	A	Y	G	E	L	A	G	C	A	S	T	F	D	P	A	P	G	S	G	R	P	A	G	L	E	R	A	I	R	L	A	L	N	D	A	G	T	G	P	E	D	V	D	V
Template Known Secondary structure		S			T	T	S	T	T				B		B	B																	T	T					S														T	T						S													T			G	G	G
Template Predicted Secondary structure
Template SS confidence
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
		313	.	.	.	.	.	.	320	.					.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.
Predicted Secondary structure											.	.	.	.																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence											.	.	.	.																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	E	A	N	E	A	F	A	A	.	.	.	.	Q	A	L	S	V	G	K	M	L	E	W	D	E	R	R	V	N	V	N	G	G	A	I	A	L	G	H	P	I	G	A	S	G	C	R	I	L	V	S	L	V	H	E	M	V	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation											.	.	.	.																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.										.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																								.
Template Sequence		V	F	A	D	G	A	G	V	P	E	L	D	A	A	E	A	R	A	I	G	R	V	.	F	G	R	E	G	V	P	V	T	V	P	K	T	T	T	G	R	L	Y	S	G	G	G	P	L	D	V	V	T	A	L	M	S	L	R	E	G	V	I	A	P	T	A	G	V	T	S	V	P	R	E	Y	G	I	D	L	V
Template Known Secondary structure								S	S															.			T	T		S					G	G	G	G	T		B		G	G	G																T	S	B			B		S						G	G	G
Template Predicted Secondary structure																								.
Template SS confidence
		294	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.		.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.
								368	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.
Predicted Secondary structure		.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	R	N	A	R	K	G	L	A	T	L	C	I	G	G	G	Q	G	V	A	L	T	I	E	R	D
Query Conservation		.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.
Template Conservation
Template Sequence		L	G	E	P	R	S	T	A	P	R	T	A	L	V	L	A	R	G	R	W	G	F	N	S	A	A	V	L	R	R	F
Template Known Secondary structure		B	S	S		B														T	T	T
Template Predicted Secondary structure
Template SS confidence
		373	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions