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Job DescriptionQ46939
Confidence99.96%DateThu Jan 5 12:35:58 GMT 2012
Rank51Aligned Residues256
% Identity18%Templatec1cmlA_
PDB info PDB header:transferaseChain: A: PDB Molecule:protein (chalcone synthase); PDBTitle: chalcone synthase from alfalfa complexed with malonyl-coa
Resolution1.69 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  SAVELGSLVVKALIERTGVPAYAVDEVILGQVLTAGAGQNPARQSAIKGGLPNSVSAITIND. VCGSGLKALHLATQAIQ
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Template Sequence  EVPRLGKEAAVKAIKEWGQPKSKITHLIVCTTS. GVDMPGADYQLTKLLGLRPYVKRYMMYQQGAFAGGTVLRLAKDLAE
Template Known Secondary structure 
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GGG

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Query Sequence  CGEADIVIAGGQENMSRAPHVLTDSRTGAQLGNSQLVDSLVHDGLWDAFNDYHIGVTAENLAREYGISRQLQDAYALSSQ
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Template Sequence  NNKGARVLVVCSEVTAVTFRGPSDTHLDSLV. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  TSTT

GGGT




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Query Sequence  QKARAAIDAGRFKDEIVPVMTQSNGQTLVVDTDEQPRTDASAEGLARLNPSFDSLGSVTAGNASSINDGAAAVMMMSEAK
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . GQALFGDGAAALIVGSDPV
Template Known Secondary structure  .............................................................B

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Query Sequence  ARALNLPVLARIRAFASVGVDPALM. . . . . . . . . . . . . . . . . . . . . GIAPVYATRRCLERVGWQLAEVDLIEANEAFAAQ
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Template Sequence  PEIEKPIFEMVWTAQTIAPDSEGAIDGHLREAGLTFHLLKDVPGIVSKNITKALVEAFEPLGISDYNSIFWIAHPGGPAI
Template Known Secondary structure  BTTB



TT
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Query Sequence  ALSVGKMLEWDERRVNVNGGAIA. LGHPIGASGCRILVSLVHEMV. . . . . . . KRNARKGLATLCIGGGQGVALTIER
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Template Sequence  LDQVEQKLALKPEKMNATREVLSEYGNMSSACVLFILDEMRKKSTQNGLKTTGEGLEWGVLFGFGPGLTIETVVLRS
Template Known Secondary structure  T

GGGG
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GGGTT
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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