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Job Description | P23841 | Confidence | 97.28% | Date | Thu Jan 5 11:39:47 GMT 2012 |
Rank | 61 | Aligned Residues | 76 |
% Identity | 16% | Template | d1s3ja_ |
SCOP info | DNA/RNA-binding 3-helical bundle
| "Winged helix" DNA-binding domain
| MarR-like transcriptional regulators
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Resolution | 2.25 |
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Predicted Secondary structure |   |
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Query Sequence |   |
T | D | L | K | L | L | R | Y | F | L | A | V | A | E | E | L | . |
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H | F | G | R | A | A | A | R | L | N | M | S | Q | P | P | L | S | I | H | I | K | E | L | E | N | Q | L | G | T | Q | L | F | I | R | H | S | R | S | . |
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V | V | L | T | H | A | G | K | I | L | M | E | E | S | R | R | L | L | V |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
V | T | P | A | Q | L | F | V | L | A | S | L | K | K | H | G | S | L | K | V | S | E | I | A | E | R | X | E | V | K | P | S | A | V | T | L | X | A | D | R | L | E | Q | K | . |
N | L | I | A | R | T | H | N | T | K | D | R | R | V | I | D | L | S | L | T | D | E | G | D | I | K | F | E | E | V | L | A | G | R | K |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
35 | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | |
. | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . |
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80 | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
N | A | N | N |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
A | I | X | A |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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114 | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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