Return to main results Retrieve Phyre Job Id

Job DescriptionP23841
Confidence97.28%DateThu Jan 5 11:39:47 GMT 2012
Rank61Aligned Residues76
% Identity16%Templated1s3ja_
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain MarR-like transcriptional regulators
Resolution2.25

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7..10.........20.. .......30.........40.........50.........60 .........70.........
Predicted Secondary structure 


..









.....


Query SS confidence 















. .





































. . . . .


















Query Sequence  TDLKLLRYFLAVAEEL. . HFGRAAARLNMSQPPLSIHIKELENQLGTQLFIRHSRS. . . . . VVLTHAGKILMEESRRLLV
Query Conservation 
 
  
  
  
   
..
 
 

  
 


 


  
  

  

  

 
    .....  

  
  
   
     
Alig confidence 















..

























.










.....


















Template Conservation 

  
   
  
      
  


  
 
    

  
  
   .
 
 
     
 
   
 

  
            
Template Sequence  VTPAQLFVLASLKKHGSLKVSEIAERXEVKPSAVTLXADRLEQK. NLIARTHNTKDRRVIDLSLTDEGDIKFEEVLAGRK
Template Known Secondary structure 

STS
T.TS
SS
TTS
Template Predicted Secondary structure 









.










Template SS confidence 















































































   35....40.........50.........60.........70........ .80.........90.........100.........110...
 
   80...
Predicted Secondary structure 



Query SS confidence 



Query Sequence  NANN
Query Conservation      
Alig confidence 



Template Conservation      
Template Sequence  AIXA
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 



   114...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions