Job Description P23841 Confidence 99.70% Date Thu Jan 5 11:39:47 GMT 2012 Rank 21 Aligned Residues 191 % Identity 18% Template c3jv9B_ PDB info PDB header:transcription Chain: B: PDB Molecule:transcriptional regulator, lysr family; PDBTitle: the structure of a reduced form of oxyr from n. meningitidis Resolution 2.39 Å

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		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	R	I	E	L	G	V	V	G	T	A	M	W	G	R	M	R	P	V	M	R	R	F	L	R	E	N	P	N	V	D	V	L	F	R	E	K	M	P	A	M	Q	M	A	L	L	E	R	R	E	L	D	A	G	I	W	R	M	A	T	E	P	P	T	G	F	T	S	L	R	L	H	E	S	A	F	L	V	A
Query Conservation
Alig confidence																																																																.
Template Conservation																																																																.
Template Sequence		E	G	A	F	K	L	G	L	I	F	T	V	A	P	Y	L	L	P	K	L	I	V	S	L	R	R	T	A	P	K	X	P	L	X	L	E	E	N	Y	T	H	T	L	T	E	S	L	K	R	G	D	V	D	A	I	I	V	A	E	P	F	Q	.	E	P	G	I	V	T	E	P	L	Y	D	E	P	F	F	V	I
Template Known Secondary structure											T	T	T																	T	T																			T	T	S	S	S						S	S			.		T	T
Template Predicted Secondary structure																																																																.
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.		.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	P	E	E	H	H	L	S	S	F	S	T	V	P	L	E	A	L	R	D	E	Y	F	V	T	M	P	P	V	Y	T	D	W	D	F	L	Q	R	V	C	Q	Q	V	G	F	S	P	V	V	I	R	E	V	N	E	P	Q	T	V	L	A	M	V	S	M	G	I	G	I	T	L	I	A	D	S	Y	A	Q	M	N
Query Conservation
Alig confidence																																										.	.	.	.	.	.	.
Template Conservation																																										.	.	.	.	.	.	.
Template Sequence		V	P	K	G	H	S	F	E	E	L	D	A	V	S	P	R	X	L	G	E	E	Q	V	L	L	L	T	E	G	N	C	X	R	D	Q	V	L	S	S	C	.	.	.	.	.	.	.	T	N	T	L	Q	G	S	S	I	N	T	I	R	H	X	V	A	S	G	L	A	I	S	V	L	P	A	T	A	L	T	E	N
Template Known Secondary structure				T	T		G	G	G	G		S	S			S	S	G	G	G	G	S							T	T									T	T		.	.	.	.	.	.	.							S	S										T	T	S							G	G	G			G	G
Template Predicted Secondary structure																																										.	.	.	.	.	.	.
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.								.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		256	.		.	.	260	.	.	.	.	.	.		.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.		.	.	.	.	.	.	.	290	.	.	.	.
Predicted Secondary structure				.										.																	.
Query SS confidence				.										.																	.
Query Sequence		W	P	.	G	V	I	F	R	P	L	K	Q	.	R	I	P	A	D	L	Y	I	V	Y	E	T	Q	Q	V	T	.	P	A	M	V	K	L	L	A	A	L	T	Q
Query Conservation				.										.																	.
Alig confidence				.										.																	.
Template Conservation
Template Sequence		D	H	X	L	F	S	I	I	P	F	E	G	T	P	P	S	R	R	V	V	L	A	Y	R	R	N	F	V	R	P	K	A	L	S	A	X	K	A	A	I	X	Q
Template Known Secondary structure		G	G	G	T							S	S	S												T	T																T
Template Predicted Secondary structure
Template SS confidence
		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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