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Job DescriptionP23841
Confidence99.55%DateThu Jan 5 11:39:47 GMT 2012
Rank32Aligned Residues194
% Identity13%Templatec3hhfB_
PDB info PDB header:transcription regulatorChain: B: PDB Molecule:transcriptional regulator, lysr family; PDBTitle: structure of crga regulatory domain, a lysr-type transcriptional2 regulator from neisseria meningitidis.
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   95....100.........110.........120.........130.........140.........150.........160.........170....
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Query Sequence  EAGRIELGVVGTAMWGRMRPVMRRFLRENPNVDVLFREKMPAMQMALLERRELDAGIWRMATEPPTGFTSLRLHESAFLV
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Template Sequence  PQGVLSVDSAXPXVLHLLAPLAAKFNERYPHIRLSLVSSEGYINLIERKVDIALRA. . . . . . GDDSGLRARHLFDSRFRV
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   91........100.........110.........120.........130.........140...... ...150.........160....
 
   175....180.........190.........200.........210.........220.........230.........240.........250....
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Query Sequence  AMPEEHHLSSFSTVPLEALRDEYFVTMPPVYTDWDFLQRVCQQVGFSPVVIREVNEPQTVLAMVSMGIGITLIADSYAQM
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Template Sequence  IASPEYLAKHGTPQSTEELAGHQCLGFTEPGSLNTWAVLDAQGNPYKISPHFTASSGEILRSLCLSGCGIVCLSDFLVDN
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SSGGGGGGS
B
SS
GGGG
TTS



SSSSTTS
B
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   167..170.........180.........190.........200.........210.........220.........230.........240......
 
   255....260...... ...270.........280 .........290....
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Query Sequence  NWPGVIFRPLKQ. . . . RIPADLYIVYETQQ. VTPAMVKLLAALTQ
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Template Sequence  DIAEGKLIPLLAEQTSDKTHPFNAVYYSDKAVNLRLRVFLDFLVE
Template Known Secondary structure  TSS
TTTB



GGGGG
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   247..250.........260.........270.........280.........290.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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