Return to main results Retrieve Phyre Job Id

Job DescriptionP23841
Confidence97.07%DateThu Jan 5 11:39:47 GMT 2012
Rank74Aligned Residues80
% Identity10%Templatec3bjaA_
PDB info PDB header:transcription regulatorChain: A: PDB Molecule:transcriptional regulator, marr family, putative; PDBTitle: crystal structure of putative marr-like transcription regulator2 (np_978771.1) from bacillus cereus atcc 10987 at 2.38 a resolution
Resolution2.38 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.. .......30.........40.........50........ .60.........70.....
Predicted Secondary structure 






..







.....


Query SS confidence 



















. .



































. . . . .
















Query Sequence  RVYRTDLKLLRYFLAVAEEL. . HFGRAAARLNMSQPPLSIHIKELENQLGTQLFIRHS. . . . . RSVVLTHAGKILMEESR
Query Conservation      
 
  
  
  
   
..
 
 

  
 


 


  
  

  

  

 
  .....    

  
  
   
 
Alig confidence 



















..
























.









.....
















Template Conservation      

  
  

  
      
  


  
 
    

  
  

 . 
 
 
     
 
   
 

  
        
Template Sequence  EQYDISYVQFGVIQVLAKSGKVSXSKLIENXGCVPSNXTTXIQRXKR. DGYVXTEKNPNDQRETLVYLTKKGEETKKQVD
Template Known Secondary structure  GGGT

S
S
SS

TT.TTS
SS
TT

Template Predicted Secondary structure 












.











Template SS confidence 















































































   26...30.........40.........50.........60.........70.. .......80.........90.........100....
 
   76...80...
Predicted Secondary structure 





Query SS confidence 







Query Sequence  RLLVNANN
Query Conservation          
Alig confidence 







Template Conservation          
Template Sequence  VQYSDFLK
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 







   105....110..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions