Job Description P23841 Confidence 99.67% Date Thu Jan 5 11:39:47 GMT 2012 Rank 24 Aligned Residues 197 % Identity 21% Template c2ql3G_ PDB info PDB header:transcription Chain: G: PDB Molecule:probable transcriptional regulator, lysr family protein; PDBTitle: crystal structure of the c-terminal domain of a probable lysr family2 transcriptional regulator from rhodococcus sp. rha1 Resolution 2.05 Å

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		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	R	I	E	L	G	V	V	G	T	A	M	W	G	R	M	R	P	V	M	R	R	F	L	R	E	N	P	N	V	D	V	L	F	R	E	K	M	P	A	M	Q	M	A	L	L	E	R	R	E	L	D	A	G	I	W	R	M	A	T	E	P	P	T	G	F	T	S	L	R	L	H	E	S	A	F	L	V	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	G	P	I	A	V	G	C	Y	P	A	L	G	P	T	I	L	P	S	X	L	Y	A	F	T	A	E	Y	P	R	A	S	V	E	F	R	E	D	T	Q	N	R	L	R	T	Q	L	E	G	G	E	L	D	V	A	I	V	Y	D	L	D	L	S	P	E	W	Q	T	V	P	L	X	T	R	E	P	X	V	V	L
Template Known Secondary structure											G	G	G	T	T	T	T													T	T																				T	S		S						S	S	S			S	S
Template Predicted Secondary structure
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	P	E	E	H	H	L	S	S	F	S	T	V	P	L	E	A	L	R	D	E	Y	F	V	T	M	P	P	V	Y	T	D	W	D	F	L	Q	R	V	C	Q	Q	V	G	F	S	P	V	V	I	R	E	V	N	E	P	Q	T	V	L	A	M	V	S	M	G	I	G	I	T	L	I	A	D	S	Y	A	Q	M	N
Query Conservation
Alig confidence																																.
Template Conservation																																.
Template Sequence		G	A	E	H	P	L	A	G	V	D	G	P	V	R	L	A	D	L	A	E	H	P	X	V	L	L	D	A	P	P	.	S	T	N	H	A	X	D	V	C	R	E	A	G	F	A	P	R	V	A	Y	R	T	A	N	F	E	T	A	R	A	F	V	G	R	G	L	G	W	T	L	L	L	Q	R	P	R	V	D	V
Template Known Secondary structure			T	T	S	T	T	T	T	S		S		B		G	G	G	G	T	T	S								T	T	.												T	T										S												T	S		B				S				S	S		B
Template Predicted Secondary structure																																.
Template SS confidence
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
		256	.	.				.	260	.	.	.	.	.	.			.	.	.	270	.	.	.	.	.	.	.	.	.	280		.	.	.	.	.	.	.	.	.	290	.	.	.
Predicted Secondary structure					.	.	.									.	.															.
Query SS confidence					.	.	.									.	.															.
Query Sequence		W	P	G	.	.	.	V	I	F	R	P	L	K	Q	.	.	R	I	P	A	D	L	Y	I	V	Y	E	T	Q	Q	.	V	T	P	A	M	V	K	L	L	A	A	L	T
Query Conservation					.	.	.									.	.															.
Alig confidence					.	.	.									.	.															.
Template Conservation
Template Sequence		T	Y	E	G	L	P	V	V	V	K	P	I	A	E	P	K	P	A	S	V	A	V	V	V	A	W	H	Q	E	A	T	L	S	R	V	A	R	A	F	I	R	F	V	T
Template Known Secondary structure			T	T	S		B						B		S	S													T	T															T
Template Predicted Secondary structure
Template SS confidence
		259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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