 |
Job Description | P23841 | Confidence | 94.98% | Date | Thu Jan 5 11:39:47 GMT 2012 |
Rank | 132 | Aligned Residues | 43 |
% Identity | 16% | Template | c2l4aA_ |
PDB info |
PDB header:dna binding protein | Chain: A: PDB Molecule:leucine responsive regulatory protein; |
PDBTitle: nmr structure of the dna-binding domain of e.coli lrp
|
Resolution | UNK |
|
  |   |
6 | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | |
|
. | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
| . | . |
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | T | D | L | K | L | L | R | Y | F | L | A | V | A | E | E | L | . |
. |
H | F | G | R | A | A | A | R | L | N | M | S | Q | P | P | L | S | I | H | I | K | E | L | E | N | Q |
Query Conservation |   |
  |
|   |
|   |   |
|   |   |
|   |   |
|   |   |   |
| . | . |
|   |
|   |
|
|   |   |
|   |
|
|
|   |
|
|
|   |   |
|   |   |
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|   |   |
|   |   |
|
|   |   |
|   |   |
|   |
|   |
|   |   |
|
|
|   |   |
|
|
|
|   |   |
|
|   |   |
|
|   |   |
|   |   |   |
Template Sequence |   |
D | L | D | R | I | D | R | N | I | L | N | E | L | Q | K | D | G | R | I | S | N | V | E | L | S | K | R | V | G | L | S | P | T | P | C | L | E | R | V | R | R | L | E | R | Q |
Template Known Secondary structure |   |
G |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
| T | T |
|
| S |  |  |  |  |  | T | T | T | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T |
Template Predicted Secondary structure |   |
 |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
11 | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|