Job Description P23841 Confidence 97.38% Date Thu Jan 5 11:39:47 GMT 2012 Rank 53 Aligned Residues 78 % Identity 14% Template c2gxgA_ PDB info PDB header:transcription Chain: A: PDB Molecule:146aa long hypothetical transcriptional regulator; PDBTitle: crystal structure of emrr homolog from hyperthermophilic archaea2 sulfolobus tokodaii strain7 Resolution 1.45 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.		.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60						.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.																																							.	.	.	.	.
Query SS confidence																				.																																							.	.	.	.	.
Query Sequence		Y	R	T	D	L	K	L	L	R	Y	F	L	A	V	A	E	E	L	.	H	F	G	R	A	A	A	R	L	N	M	S	Q	P	P	L	S	I	H	I	K	E	L	E	N	Q	L	G	T	Q	L	F	I	R	H	S	R	S	.	.	.	.	.	V	V	L	T	H	A	G	K	I	L	M	E	E	S	R	R	L	L
Query Conservation																				.																																							.	.	.	.	.
Alig confidence																				.																											.												.	.	.	.	.
Template Conservation																																															.
Template Sequence		L	N	L	S	Y	L	D	F	L	V	L	R	A	T	S	D	G	P	K	T	M	A	Y	L	A	N	R	Y	F	V	T	Q	S	A	I	T	A	S	V	D	K	L	E	E	M	.	G	L	V	V	R	V	R	D	R	E	D	R	R	K	I	L	I	E	I	T	E	K	G	L	E	T	F	N	K	G	I	E	I	Y
Template Known Secondary structure		T	T													T	T	S		B									T	T																T	.	T	S							S	S		T	T
Template Predicted Secondary structure																																															.
Template SS confidence
		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.		.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
		79	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	N	A	N	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	K	L	A	N
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		112	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions