Job Description P23841 Confidence 100.00% Date Thu Jan 5 11:39:47 GMT 2012 Rank 2 Aligned Residues 287 % Identity 18% Template c2esnC_ PDB info PDB header:structural genomics, unknown function Chain: C: PDB Molecule:probable transcriptional regulator; PDBTitle: the crystal structure of probable transcriptional regulator pa04772 from pseudomonas aeruginosa Resolution 2.10 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	Y	R	T	D	L	K	L	L	R	Y	F	L	A	V	A	E	E	L	H	F	G	R	A	A	A	R	L	N	M	S	Q	P	P	L	S	I	H	I	K	E	L	E	N	Q	L	G	T	Q	L	F	I	R	H	S	R	S	V	V	L	T	H	A	G	K	I	L	M	E	E	S	R	R	L	L	V	N	A	N	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	R	R	L	D	L	N	L	L	L	V	F	D	A	L	Y	R	H	R	N	V	G	T	A	A	S	E	L	A	I	S	A	S	A	F	S	H	A	L	G	R	L	R	Q	G	L	D	D	E	L	F	L	R	Q	G	N	R	M	Q	P	T	Q	R	A	E	H	L	A	A	A	V	A	A	A	L	R	A	L	G	E
Template Known Secondary structure					S		T	T												S										T	S																T	T	S							T	T
Template Predicted Secondary structure
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.		.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure																.
Query SS confidence																.
Query Sequence		V	L	A	R	I	E	Q	I	G	R	G	E	A	G	.	R	I	E	L	G	V	V	G	T	A	M	W	G	R	M	R	P	V	M	R	R	F	L	R	E	N	P	N	V	D	V	L	F	R	E	K	M	P	A	M	Q	M	A	L	L	E	R	R	E	L	D	A	G	I	W	R	M	A	T	E	P	P	T	G	F
Query Conservation																.
Alig confidence																.																																																												.	.
Template Conservation																																																																												.	.
Template Sequence		G	L	E	E	W	R	P	F	V	P	G	Q	S	Q	R	T	F	V	F	A	A	T	D	Y	T	A	F	A	L	L	P	P	L	M	N	R	L	Q	H	S	A	P	G	V	R	L	R	L	V	N	A	E	R	K	L	S	V	E	A	L	A	S	G	R	I	D	F	A	L	G	Y	D	R	L	.	.	P	E	G	I
Template Known Secondary structure					T	T	S				T	T	T																														T	T									S	S	S								T	T	S		S									.	.		T	T
Template Predicted Secondary structure																																																																												.	.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.			.	160	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	S	L	R	L	H	E	S	A	F	L	V	A	M	P	E	E	H	H	L	S	S	F	S	T	V	P	L	E	A	L	R	D	E	Y	F	V	T	M	P	P	V	Y	T	D	W	D	F	L	Q	R	V	C	Q	Q	V	G	F	S	P	V	V	I	R	E	V	N	E	P	Q	T	V	L	A	M	V	S	M	G	I
Query Conservation
Alig confidence																										.
Template Conservation																										.
Template Sequence		Q	A	H	D	W	F	A	D	R	Y	V	V	V	A	R	R	D	H	P	R	L	A	G	A	.	P	T	L	E	G	Y	L	A	E	R	H	A	V	V	T	P	W	N	E	D	S	G	V	I	D	R	L	L	A	R	S	G	L	R	R	E	V	A	V	Q	L	P	T	V	L	A	A	L	F	L	A	G	S	T	D
Template Known Secondary structure																	T	T		T	T		S	S	S	.								T	S							T	T			S	S									T	T	T										S											T	S	S
Template Predicted Secondary structure																										.
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190		.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.			.	.	260	.	.	.	.	.	.		.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
Predicted Secondary structure																	.	.										.
Query SS confidence																	.	.										.
Query Sequence		G	I	T	L	I	A	D	S	Y	A	Q	M	N	W	P	.	.	G	V	I	F	R	P	L	K	Q	.	R	I	P	A	D	L	Y	I	V	Y	E	T	Q	Q	V	T	P	A	M	V	K	L	L	A	A	L	T	Q
Query Conservation																	.	.										.
Alig confidence																	.	.										.															.
Template Conservation																																											.
Template Sequence		F	L	L	T	A	P	R	H	A	A	R	A	L	A	E	A	A	G	L	A	L	Y	P	A	P	F	D	I	P	P	Y	V	L	R	L	Y	S	H	V	Q	H	.	R	D	A	H	A	W	M	I	G	Q	L	K	G
Template Known Secondary structure																			T							S	S													T	T		.											T	T	S
Template Predicted Secondary structure																																											.
Template SS confidence
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.		.	.	.	290	.	.	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions