Job Description P23841 Confidence 96.50% Date Thu Jan 5 11:39:47 GMT 2012 Rank 94 Aligned Residues 79 % Identity 16% Template c1p4xA_ PDB info PDB header:transcription Chain: A: PDB Molecule:staphylococcal accessory regulator a homologue; PDBTitle: crystal structure of sars protein from staphylococcus aureus Resolution 2.20 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.					.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60						.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure																							.	.	.	.																																							.	.	.	.	.
Query SS confidence																							.	.	.	.																																							.	.	.	.	.
Query Sequence		E	R	V	Y	R	T	D	L	K	L	L	R	Y	F	L	A	V	A	E	E	L	.	.	.	.	H	F	G	R	A	A	A	R	L	N	M	S	Q	P	P	L	S	I	H	I	K	E	L	E	N	Q	L	G	T	Q	L	F	I	R	H	S	R	S	.	.	.	.	.	V	V	L	T	H	A	G	K	I	L	M	E
Query Conservation																							.	.	.	.																																							.	.	.	.	.
Alig confidence																							.	.	.	.																											.												.	.	.	.	.
Template Conservation																																																					.
Template Sequence		K	P	E	V	D	M	T	I	K	E	F	I	L	L	T	Y	L	F	H	Q	Q	E	N	T	L	P	F	K	K	I	V	S	D	L	C	Y	K	Q	S	D	L	V	Q	H	I	K	V	L	V	K	H	.	S	Y	I	S	K	V	R	S	K	I	D	E	R	N	T	Y	I	S	I	S	E	E	Q	R	E	K	I	A
Template Known Secondary structure		T	T	T		S	S													S		S		S											S	S	S		G	G	G	T										T	.	T	S							S	S	S	T	T	S
Template Predicted Secondary structure																																																					.
Template SS confidence
		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.		.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
		73	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	S	R	R	L	L	V	N	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	R	V	T	L	F	D	Q	I
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		106	.	.	.	110	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions