 |
Job Description | P08192 | Confidence | 95.67% | Date | Thu Jan 5 11:00:51 GMT 2012 |
Rank | 51 | Aligned Residues | 93 |
% Identity | 17% | Template | d1j8yf2 |
SCOP info | P-loop containing nucleoside triphosphate hydrolases
| P-loop containing nucleoside triphosphate hydrolases
| Nitrogenase iron protein-like
|
Resolution | 2.00 |
|
 |
  |   |
42 | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . |
Predicted Secondary structure |   |
|
|
|  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | G | V | L | K | P | A | P | F | V | F | T | V | A | G | T | N | G | K | G | T | T | C | R | T | L | E | S | I | L | M | A | A | G | Y | K | V | G | V | Y | S | S | P | H | L | V | R | Y | T | E | R | V | R | V | Q | G | Q | E | L | P | E | S | A | H | T | A | S | F | A | E | I | E | S | A | R | G | D | I | S | L |
Query Conservation |   |
|
|   |
|   |   |   |   |   |
|
|   |
|
|
|
|
|
|
|
|
|
|   |   |
|
|   |   |
|
|   |   |   |
|   |   |
|
|   |   |
|
|
|   |
|   |   |   |   |
|   |
|   |
|   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |   |   |
|   |
|
|   |
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|   |   |   |   |   |   |
|   |   |
|   |
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|   |
|
|   |
|   |
|
|   |
|
|
|   |   |
|
|   |   |
|
|
|
|   |   |   |   |   |
Template Sequence |   |
K | V | I | P | D | K | I | P | Y | V | I | M | L | V | G | V | Q | G | . |
. |
T | T | A | G | K | L | A | Y | F | Y | K | K | K | G | F | K | V | G | L | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
V | G | A | D | V | Y | R | P | A | A | L | E | Q | L | Q | Q | L | G | Q | Q | I | G | V | P | V | Y | G | E | P |
Template Known Secondary structure |   |
|
| S |
| S | S | S | S |  |  |  |  |  |  |
| S |
|
| . | . |
|  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  | . | . | . | . | . | . | . | . | . | . | . | . |  |  |
|
|
| S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
|  |  |
|
| T |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
| . | . |
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
91 | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | |
|
. | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
. | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . |
  |
  |   |
122 | . | . | . | . | . | . | . | 130 | |
|
. | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  | . | . |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | Y | F | E | Y | G | T | L | S | . |
. |
A | L | W | L | F | K | Q | A | Q | L | D | V | V | I | L | E | V | G |
Query Conservation |   |
|   |   |
|   |   |
|   |   | . | . |
|   |   |   |
|   |   |   |   |   |
|   |   |
|
|
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |
|
|
|
|
|
|
Template Sequence |   |
G | E | K | D | V | V | G | I | A | K | R | G | V | E | K | F | L | S | E | K | M | E | I | I | I | V | D | T | A |
Template Known Secondary structure |   |
T |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |  |  |
|
|
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
161 | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|