Job Description P08192 Confidence 99.50% Date Thu Jan 5 11:00:51 GMT 2012 Rank 30 Aligned Residues 122 % Identity 17% Template d1gg4a1 SCOP info MurD-like peptide ligases, peptide-binding domain MurD-like peptide ligases, peptide-binding domain MurCDEF C-terminal domain Resolution 2.30

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		286	.	.	.	290	.	.	.	.			.	.	.	.	.	300	.	.		.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.							.	.	.	.	340	.	.	.	.	.	.	.	.	.		350	.	.	.	.	.
Predicted Secondary structure											.	.									.																																		.	.	.	.	.	.															.
Query SS confidence											.	.									.																																		.	.	.	.	.	.															.
Query Sequence		L	P	G	R	F	Q	I	V	S	.	.	E	S	P	R	V	I	F	D	.	V	A	H	N	P	H	A	A	E	Y	L	T	G	R	M	K	A	L	P	K	N	G	R	V	L	A	V	I	G	M	L	H	D	.	.	.	.	.	.	K	D	I	A	G	T	L	A	W	L	K	S	V	V	.	D	D	W	Y	C	A
Query Conservation											.	.									.																																		.	.	.	.	.	.															.
Alig confidence											.	.									.																				.	.													.	.	.	.	.	.															.
Template Conservation																																									.	.
Template Sequence		V	P	G	R	L	F	P	I	Q	L	A	E	N	Q	L	L	L	D	D	S	Y	N	A	N	V	G	S	X	T	A	A	V	Q	V	L	A	E	X	P	.	.	G	Y	R	V	L	V	V	G	D	X	A	E	L	G	A	E	S	E	A	C	H	V	Q	V	G	E	A	A	K	A	A	G	I	D	R	V	L	S	V
Template Known Secondary structure			T	T	S	S							T	T								S																	S	S	.	.	S													T	T																	T		S
Template Predicted Secondary structure																																									.	.
Template SS confidence
		313	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.			.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390
		356	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.			.	.	.	400	.	.	.	.	.	.		.	.	.	410	.	.	.	.	.
Predicted Secondary structure																																											.	.											.
Query SS confidence																																											.	.											.
Query Sequence		P	L	E	G	P	R	G	A	T	A	E	Q	L	L	E	H	L	G	N	G	K	S	F	D	S	V	A	Q	A	W	D	A	A	M	A	D	A	K	A	E	D	.	.	T	V	L	V	C	G	S	F	H	T	.	V	A	H	V	M	E	V	I	D
Query Conservation																																											.	.											.
Alig confidence						.	.	.	.	.	.																																.	.											.
Template Conservation						.	.	.	.	.	.
Template Sequence		G	K	Q	S	.	.	.	.	.	.	H	A	I	S	T	A	S	G	V	G	E	H	F	A	D	K	T	A	L	I	T	R	L	K	L	L	I	A	E	Q	Q	V	I	T	I	L	V	K	G	S	R	S	A	A	X	E	E	V	V	R	A	L	Q
Template Known Secondary structure		S	S	S	T	.	.	.	.	.	.							T	T	S					S	S																S	S									G	G	G	T	T
Template Predicted Secondary structure						.	.	.	.	.	.
Template SS confidence
		391	.	.	.							.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions