Job Description P08192 Confidence 100.00% Date Thu Jan 5 11:00:51 GMT 2012 Rank 19 Aligned Residues 217 % Identity 18% Template d1e8ca3 SCOP info Ribokinase-like MurD-like peptide ligases, catalytic domain MurCDEF Resolution 2.00

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		45	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	K	P	A	P	F	V	F	T	V	A	G	T	N	G	K	G	T	T	C	R	T	L	E	S	I	L	M	A	A	G	Y	K	V	G	V	Y	S	S	P	H	L	V	R	Y	T	E	R	V	R	V	Q	G	Q	E	L	P	E	S	A	H	T	A	S	F	A	E	I	E	S	A	R	G	D	I	S	L	T	Y	F
Query Conservation
Alig confidence																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	S	D	N	L	R	L	V	G	V	T	G	T	N	G	K	T	T	T	T	Q	L	L	A	Q	W	S	Q	L	L	G	E	I	S	A	V	X	G	T	V	G	N	G	L	L	G	K	V	I	P	T	E	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	G	S
Template Known Secondary structure			T	T	S	S							S	S	S																T	T								T	T					T	T			B			S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S
Template Predicted Secondary structure																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.																								.	.	.	160
		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.		.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.		.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure																													.																																										.
Query SS confidence																													.																																										.
Query Sequence		E	Y	G	T	L	S	A	L	W	L	F	K	Q	A	Q	L	D	V	V	I	L	E	V	G	L	G	G	.	R	L	D	A	T	N	I	V	D	A	D	V	A	V	V	T	S	I	A	L	D	H	T	D	W	L	G	P	D	R	E	S	I	G	R	E	K	A	G	I	F	.	R	S	E	K	P	A	I	V	G	E
Query Conservation																													.																																										.
Alig confidence																													.																												.														.
Template Conservation																																																									.
Template Sequence		A	V	D	V	Q	H	E	L	A	G	L	V	D	Q	G	A	T	F	C	A	X	E	V	S	S	H	G	L	V	Q	H	R	V	A	A	L	K	F	A	A	S	V	F	T	N	L	S	R	D	H	L	D	Y	H	G	.	D	X	E	H	Y	E	A	A	W	L	L	Y	S	E	H	H	C	G	Q	A	I	I	N	A
Template Known Secondary structure															T	T															T	T	T	T	T	T		B		S									S							S	.	S													T	S	B								T
Template Predicted Secondary structure																																																									.
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.		.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.														.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	E	M	P	S	T	I	A	D	V	A	Q	E	K	G	A	L	L	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	R	R	G	V	E	W	N	Y	S	V	T	D	H	D	W	A	F	S	D	A	H	G	T	L	E	N	L	P	L	P	L	V	P	Q	P	N	A	A	T	A	L	A	A	L	R	A	S	G
Query Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.																									.
Template Conservation																																																										.
Template Sequence		D	D	E	V	G	R	R	W	L	A	K	L	P	D	A	V	A	V	S	X	E	D	H	I	N	P	N	C	H	G	R	W	L	K	A	T	E	V	N	Y	H	D	S	G	A	T	I	R	F	S	S	S	W	G	D	G	.	E	I	E	S	H	L	X	G	A	F	N	V	S	N	L	L	L	A	L	A	T	L	L
Template Known Secondary structure		T	S								T	T		T	T						S	S	S				T	T	T		S												S	S									T	T				.						S		S
Template Predicted Secondary structure																																																										.
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.		.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
		270		.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
Predicted Secondary structure			.
Query SS confidence			.
Query Sequence		L	.	E	V	S	E	N	A	I	R	D	G	I	A	S	A	I	L
Query Conservation			.
Alig confidence			.
Template Conservation
Template Sequence		A	L	G	Y	P	L	A	D	L	L	K	T	A	A	R	L	Q	P
Template Known Secondary structure			T	T										G	G	G
Template Predicted Secondary structure
Template SS confidence
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions