Return to main results Retrieve Phyre Job Id

Job DescriptionP08192
Confidence23.40%DateThu Jan 5 11:00:51 GMT 2012
Rank329Aligned Residues23
% Identity17%Templatec3k81D_
PDB info PDB header:immune system, rna binding proteinChain: D: PDB Molecule:mp18 rna editing complex protein; PDBTitle: structure of the central interaction protein from the trypanosoma2 brucei editosome in complex with single domain antibodies
Resolution3.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   382.......390.........400....
Predicted Secondary structure 






Query SS confidence 






















Query Sequence  AQAWDAAMADAKAEDTVLVCGSF
Query Conservation   


         

 


 

 
Alig confidence 






















Template Conservation 
 
   

  
  
  
 
 


Template Sequence  ELFSAEVKQKVKEGNVVCVNGRL
Template Known Secondary structure 

TT
Template Predicted Secondary structure 


Template SS confidence 






















   77..80.........90.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions