Job Description P08192 Confidence 100.00% Date Thu Jan 5 11:00:51 GMT 2012 Rank 18 Aligned Residues 245 % Identity 17% Template c3eagA_ PDB info PDB header:ligase Chain: A: PDB Molecule:udp-n-acetylmuramate:l-alanyl-gamma-d-glutamyl-meso- PDBTitle: the crystal structure of udp-n-acetylmuramate:l-alanyl-gamma-d-2 glutamyl-meso-diaminopimelate ligase (mpl) from neisseria3 meningitides Resolution 2.55 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	I	K	R	T	P	Q	A	A	S	P	L	A	S	W	L	S	Y	L	E	N	L	H	S	K	T	I	D	L	G	L	E	R	V	S	L	V	A	A	R	L	G	V	L	K	P	A	P	F	V	F	T	V	A	G	T	N	G	K	G	T	T	C	R	T	L	E	S	I	L	M	A	A	G	Y	K	V	G	V	Y
Query Conservation
Alig confidence																.	.	.	.												.												.	.	.
Template Conservation																.	.	.	.												.												.	.	.
Template Sequence		V	Y	V	I	G	N	V	A	K	R	G	X	D	V	.	.	.	.	V	E	A	I	L	N	L	G	L	P	Y	.	I	S	G	P	Q	W	L	S	E	N	V	.	.	.	L	H	H	H	W	V	L	G	V	A	G	T	H	G	K	T	T	T	A	S	X	L	A	W	V	L	E	Y	A	G	L	A	P	G	F	L
Template Known Secondary structure							T	T			T	T				.	.	.	.							T	T				.											T	.	.	.	G	G	G	S							S	S	S																T	T
Template Predicted Secondary structure																.	.	.	.												.												.	.	.
Template SS confidence
		66	.	.	.	70	.	.	.	.	.	.	.	.	.					80	.	.	.	.	.	.	.	.	.	90		.	.	.	.	.	.	.	.	.	100	.				.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.						.	.	.	.	.
Predicted Secondary structure																																																																								.	.	.	.	.
Query SS confidence																																																																								.	.	.	.	.
Query Sequence		S	S	P	H	L	V	R	Y	T	E	R	V	R	V	Q	G	Q	E	L	P	E	S	A	H	T	A	S	F	A	E	I	E	S	A	R	G	D	I	S	L	T	Y	F	E	Y	G	T	L	S	A	L	W	L	F	K	Q	A	Q	L	D	V	V	I	L	E	V	G	L	G	G	.	.	.	.	.	R	L	D	A	T
Query Conservation																																																																								.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.
Template Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	G	G	V	P	E	N	F	G	V	S	A	R	L	P	Q	T	P	R	Q	D	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	S	Q	S	P	F	F	V	I	E	A	D	E	Y	D	T	A	F	F	D	K	R	S	K	F
Template Known Secondary structure			S	S			T	T	S	S		S								S	S		T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	S												S				T	T					G	G
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.																																		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.				.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure																																						.	.	.																																								.	.
Query SS confidence																																						.	.	.																																								.	.
Query Sequence		N	I	V	D	A	D	V	A	V	V	T	S	I	A	L	D	H	T	D	W	L	G	P	D	R	E	S	I	G	R	E	K	A	G	I	F	.	.	.	R	S	E	K	P	A	I	V	G	E	P	E	M	P	S	T	I	A	D	V	A	Q	E	K	G	A	L	L	Q	R	R	G	V	E	W	N	Y	S	V	.	.
Query Conservation																																						.	.	.																																								.	.
Alig confidence																								.														.	.	.														.																										.	.
Template Conservation																								.																														.
Template Sequence		V	H	Y	R	P	R	T	A	V	L	N	N	L	E	F	D	H	A	D	I	F	A	.	D	L	G	A	I	Q	T	Q	F	H	Y	L	V	R	T	V	P	S	E	G	L	I	V	C	N	G	R	Q	Q	.	S	L	Q	D	T	L	D	K	G	C	W	T	P	V	E	K	F	G	T	E	H	G	W	Q	A	G	E
Template Known Secondary structure		G	G	S			S												T	T	T	S	S	.	S													T	T	S		T	T	S						S	S			.							T	T				S						S	S	S	S	S
Template Predicted Secondary structure																								.																														.
Template SS confidence
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.		.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.		.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
				232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270		.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.																																								.
Query SS confidence		.	.																																								.
Query Sequence		.	.	T	D	H	D	W	A	F	S	D	A	H	G	T	L	E	N	L	P	L	P	L	V	P	Q	P	N	A	A	T	A	L	A	A	L	R	A	S	G	L	.	E	V	S	E	N	A	I	R	D	G	I	A	S	A	I	L	P	G	R
Query Conservation		.	.																																								.
Alig confidence		.	.																																								.
Template Conservation
Template Sequence		A	N	A	D	G	S	F	D	V	L	L	D	G	K	T	A	G	R	V	K	W	D	L	X	G	R	H	N	R	X	N	A	L	A	V	I	A	A	A	R	H	V	G	V	D	I	Q	T	A	C	E	A	L	G	A	F	K	N	V	K	R
Template Known Secondary structure				T	T	S							T	T												S																		T												T
Template Predicted Secondary structure
Template SS confidence
		263	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions