Job Description P08192 Confidence 42.74% Date Thu Jan 5 11:00:51 GMT 2012 Rank 243 Aligned Residues 136 % Identity 12% Template c3cmuA_ PDB info PDB header:recombination/dna Chain: A: PDB Molecule:protein reca; PDBTitle: mechanism of homologous recombination from the reca-2 ssdna/dsdna structures Resolution 4.20 Å

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		43	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	V	L	K	P	A	P	F	V	F	T	V	A	G	T	N	G	K	G	T	T	C	R	T	L	E	S	I	L	M	A	A	G	Y	K	V	G	V	Y	S	S	P	H	L	V	R	Y	T	E	R	V	R	V	Q	G	Q	E	L	P	E	S	A	H	T	A	S	F	A	E	I	E	S	A	R	G	D	I	S	L	T
Query Conservation
Alig confidence																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	L	P	M	G	R	I	V	E	I	Y	G	P	E	S	S	G	K	T	T	L	T	L	Q	V	I	A	A	A	Q	R	E	G	K	T	C	A	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	D	A	E	H	A	L	D	P	I	Y	A	R	K	L	G	V	D	I	D	N	L	L	C	S	Q	P	D
Template Known Secondary structure		S			T	T	S								T	T	S	S														T	T	T						.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T	S										T	T			T	T	T							S
Template Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		55	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.															.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	F	E	Y	G	T	L	S	A	L	W	L	F	K	Q	A	Q	L	D	V	V	I	L	E	V	G	L	G	G	R	L	D	A	T	N	I	V	D	A	D	V	A	V	V	T	S	I	A	L	D	H	T	D	W	L	G	P	D	R	E	S	I	G	R	E	K	A	G	I	F	R	S	E	K	P	A	I	V
Query Conservation
Alig confidence																									.	.	.	.	.	.	.	.
Template Conservation																									.	.	.	.	.	.	.	.
Template Sequence		T	G	E	Q	A	L	E	I	C	D	A	L	A	R	S	G	A	V	D	V	I	V	V	.	.	.	.	.	.	.	.	D	S	V	A	A	L	T	P	K	A	E	I	E	G	E	I	G	D	S	H	M	G	L	A	A	R	M	M	S	Q	A	M	R	K	L	A	G	N	L	K	Q	S	N	T	L	L	I
Template Known Secondary structure		S															T			S					.	.	.	.	.	.	.	.	S		G	G	G									S		S	S	S			T	T																			T	T	T
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.
Template SS confidence
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.									.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions