Job Description P08192 Confidence 100.00% Date Thu Jan 5 11:00:51 GMT 2012 Rank 9 Aligned Residues 316 % Identity 24% Template c2wtzC_ PDB info PDB header:ligase Chain: C: PDB Molecule:udp-n-acetylmuramoyl-l-alanyl-d-glutamate- PDBTitle: mure ligase of mycobacterium tuberculosis Resolution 3.00 Å

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		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	V	A	A	R	L	G	V	L	K	P	A	P	F	V	F	T	V	A	G	T	N	G	K	G	T	T	C	R	T	L	E	S	I	L	M	A	A	G	Y	K	V	G	V	Y	S	S	P	H	L	V	R	Y	T	E	R	V	R	V	Q	G	Q	E	L	P	E	S	A	H	T	A	S	F	A	E	I	E	S	A
Query Conservation
Alig confidence																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	L	A	A	T	V	Y	G	H	P	S	E	R	L	T	V	I	G	I	T	G	T	S	G	K	T	T	T	T	Y	L	V	E	A	G	L	R	A	A	G	R	V	A	G	L	I	G	T	I	G	I	R	V	G	G	A	D	L	P	S	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure								T	T		G	G	G	S	S							S	S	S																T	T							S	S	S					T	T						S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130		.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.		.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure																	.																						.																																										.
Query SS confidence																	.																						.																																										.
Query Sequence		R	G	D	I	S	L	T	Y	F	E	Y	G	T	L	S	.	A	L	W	L	F	K	Q	A	Q	L	D	V	V	I	L	E	V	G	L	G	G	.	R	L	D	A	T	N	I	V	D	A	D	V	A	V	V	T	S	I	A	L	D	H	T	D	W	L	G	P	D	R	E	S	I	G	R	E	K	A	G	I	F	.
Query Conservation																	.																						.																																										.
Alig confidence		.	.	.	.	.											.																						.																												.														.
Template Conservation		.	.	.	.	.																																																													.
Template Sequence		.	.	.	.	.	L	T	T	P	E	A	P	T	L	Q	A	M	L	A	A	M	V	E	R	G	V	D	T	V	V	M	E	V	S	S	H	A	L	A	L	G	R	V	D	G	T	R	F	A	V	G	A	F	T	N	L	S	R	D	H	L	D	F	H	P	.	S	M	A	D	Y	F	E	A	A	S	L	F	D	P
Template Known Secondary structure		.	.	.	.	.	S	S	S																T	T																T	T	T	T	T				S									S			T	T	T	S	S	.	S									T	T	T		T
Template Predicted Secondary structure		.	.	.	.	.																																																													.
Template SS confidence
							194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.		.	.	.	.	.	.	260	.	.	.	.	.	.	.
					193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.									.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
Predicted Secondary structure		.	.	.																																												.	.	.	.	.	.	.	.
Query SS confidence		.	.	.																																												.	.	.	.	.	.	.	.
Query Sequence		.	.	.	R	S	E	K	P	A	I	V	G	E	P	E	M	P	S	T	I	A	D	V	A	Q	E	K	G	A	L	L	Q	R	R	G	V	E	W	N	Y	S	V	T	D	H	D	.	.	.	.	.	.	.	.	W	A	F	S	D	A	H	G	T	L	E	N	L	P	L	P	L	V	P	Q	P	N	A	A	T	A
Query Conservation		.	.	.																																												.	.	.	.	.	.	.	.
Alig confidence		.	.	.																																												.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	S	A	L	R	A	R	T	A	V	V	C	I	D	D	D	A	G	R	A	M	A	A	R	A	A	D	A	I	T	V	S	A	A	D	R	P	A	H	W	R	A	T	D	V	A	P	T	D	A	G	G	Q	Q	F	T	A	I	D	P	A	G	V	G	H	H	I	G	I	R	L	P	G	R	Y	N	V	A	N	C
Template Known Secondary structure		T	S	T	T			S							S	S											S	S						S	S	S	S			S										T	T	T									T	T	S								S			S
Template Predicted Secondary structure
Template SS confidence
		269	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.
		262	.	.	.	.	.	.	.	270		.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340
Predicted Secondary structure											.
Query SS confidence											.
Query Sequence		L	A	A	L	R	A	S	G	L	.	E	V	S	E	N	A	I	R	D	G	I	A	S	A	I	L	P	G	R	F	Q	I	V	S	E	S	P	R	V	I	F	D	V	A	H	N	P	H	A	A	E	Y	L	T	G	R	M	K	A	L	P	K	N	G	R	V	L	A	V	I	G	M	L	H	D	K	D	I	A	G
Query Conservation											.
Alig confidence											.																						.	.	.																									.	.	.	.	.									.	.	.	.	.	.	.	.	.
Template Conservation																																	.	.	.																									.	.	.	.	.									.	.	.	.	.	.	.	.	.
Template Sequence		L	V	A	L	A	I	L	D	T	V	G	V	S	P	E	Q	A	V	P	G	L	R	E	I	R	V	P	G	R	L	E	.	.	.	Q	G	F	L	A	L	V	D	Y	A	H	K	P	E	A	L	R	S	V	L	T	T	L	A	.	.	.	.	.	H	R	L	A	V	V	F	R	.	.	.	.	.	.	.	.	.
Template Known Secondary structure											T	T																T	T	S	S	B	.	.	.												S										T	T		.	.	.	.	.									.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																	.	.	.																									.	.	.	.	.									.	.	.	.	.	.	.	.	.
Template SS confidence
		349	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.				380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.						.	.	.	.	.	.	410	.
		341	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	A	W	L	K	S	V	V	D	D	W	Y	C	A	P	L	E	G	P	R	G	A	T	A	E	Q	L	L	E	H	L	G	N	G	K	S	F	D	S	V	A	Q	A	W	D	A	A	M	A	D	A	K	A	E	D	T	V	L	V	C	G
Query Conservation
Alig confidence		.	.															.	.	.	.	.	.	.
Template Conservation		.	.															.	.	.	.	.	.	.
Template Sequence		.	.	A	P	M	G	R	I	A	D	L	V	V	V	T	D	.	.	.	.	.	.	.	P	T	A	I	R	R	E	I	L	A	Q	V	V	E	I	A	D	R	R	D	A	I	R	H	A	V	A	W	A	R	P	G	D	V	V	L	I	A	G
Template Known Secondary structure		.	.															.	.	.	.	.	.	.																	S														T	T							S
Template Predicted Secondary structure		.	.															.	.	.	.	.	.	.
Template SS confidence
				430	.	.	.	.	.	.	.	.	.	440	.	.	.								.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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