 |
Job Description | P0A8W0 | Confidence | 36.21% | Date | Thu Jan 5 11:08:49 GMT 2012 |
Rank | 468 | Aligned Residues | 39 |
% Identity | 26% | Template | d2hgca1 |
SCOP info | DNA/RNA-binding 3-helical bundle
| "Winged helix" DNA-binding domain
| YjcQ-like
|
Resolution | UNK |
|
  |   |
39 | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | L | E | Q | M | I | R | R | R | E | F | G | E | G | E | Q | L | P | S | E | R | E | L | M | A | F | F | N | V | G | R | P | S | V | R | E | A | L | A | A | L | K | R | K | G | L | V | Q |
Query Conservation |   |
  |
|   |   |   |
|   |   |
|   |   |   |   |
|   |   |
|
|
|
|   |   |
|
|   |   |   |
|
|
|
|
|
|
|
|
|
|
|   |   |
|   |   |   |
|
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
| . |
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|
|   |   |
|
|   |   | . | . | . | . |
| . |   |   |   |   |   | . | . | . | . |
|
|
|
|   |
|
|   |
|   |   |
|
|
|
|   |
|   |
|
|
|
Template Sequence |   |
A | I | L | K | E | I | F | E | G | N | T | P | . |
. |
. |
. |
L | . |
S | E | N | D | I | . |
. |
. |
. |
G | V | T | E | D | Q | F | D | D | A | V | N | F | L | K | R | E | G | Y | I | I |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |
| S |
| . | . | . | . |
| . |
|  |  |  |  | . | . | . | . | T | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | S |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|
| . | . | . | . |
| . |
|
|
|
|
| . | . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
9 | 10 | . | . | . | . | . | . | . | . | . | 20 | |
|
|
|
. | |
. | . | . | . | . | |
|
|
|
. | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|