Return to main results Retrieve Phyre Job Id

Job DescriptionP0A8W0
Confidence58.97%DateThu Jan 5 11:08:49 GMT 2012
Rank336Aligned Residues43
% Identity14%Templated2fd5a1
SCOP infoDNA/RNA-binding 3-helical bundle Homeodomain-like Tetracyclin repressor-like, N-terminal domain
Resolution1.70

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   26...30.........40.........50.........60.........70..
Predicted Secondary structure 





















Query SS confidence 














































Query Sequence  PLARKKLSEMVEEELEQMIRRREFGEGEQLPSERELMAFFNVGRPSV
Query Conservation 
     
 
 
   
   
  
    
  



  

   






Alig confidence 























...


.















Template Conservation         
  
  

  
    
 ...   .

  

  



  
 
Template Sequence  SDKKTQTRARILGAATQALLERGA. . . VEP. SVGEVMGAAGLTVGGF
Template Known Secondary structure 

TT...TS
.
TT

GGGG
Template Predicted Secondary structure 

...


.



Template SS confidence 














































   2.......10.........20..... ... .30.........40....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions