Job Description P0A8W0 Confidence 81.23% Date Thu Jan 5 11:08:49 GMT 2012 Rank 238 Aligned Residues 140 % Identity 12% Template d1ulya_ SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Hypothetical protein PH1932 Resolution 2.50

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		57	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.			.	.	.	90	.	.	.	.	.															.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Predicted Secondary structure																																.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	E	R	E	L	M	A	F	F	N	V	G	R	P	S	V	R	E	A	L	A	A	L	K	R	K	G	L	V	Q	.	.	I	N	N	G	E	R	A	R	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	R	P	S	A	D	T	I	I	G	E	L	S	G	M	A	K	D	F	L	S	H	P	G	G
Query Conservation																																.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	I	S	Q	L	S	E	I	L	G	K	T	P	Q	T	I	Y	H	H	I	E	K	L	K	E	A	G	L	V	E	V	K	R	T	E	X	K	G	N	L	V	E	K	Y	Y	G	R	T	A	D	V	F	Y	I	N	L	Y	L	G	D	E	E	L	R	Y	I	A	R	S	R	L	K	T	K	I	D	I	F	K	R
Template Known Secondary structure											T																T	T	S										T	T									S	S	S						S		S	S
Template Predicted Secondary structure
Template SS confidence
		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	H	F	E	Q	L	R	L	F	F	E	S	S	L	V	R	Y	A	A	E	H	A	T	D	E	Q	I	D	L	L	A	K	A	L	E	I	N	S	Q	S	L	D	N	N	A	A	F	I	R	S	D	V	D	F	H	R	V	L	A	E	I	P	G	N	P	I	F	M	A	I	H	V	A	L	L	D	W	L
Query Conservation
Alig confidence																								.	.	.
Template Conservation																								.	.	.
Template Sequence		L	G	Y	Q	F	E	E	N	E	L	L	N	I	X	D	R	X	S	Q	K	E	F	.	.	.	D	A	T	V	R	I	S	K	Y	I	E	E	K	E	D	A	L	K	D	F	S	N	E	D	I	I	H	A	I	E	W	L	S	T	A	E	L	A	R	D	E	E	Y	L	E	L	L	K	R	L	G	S	I	L
Template Known Secondary structure		T	T																					.	.	.													T	G	G	G	G	T	T	S																		T	T
Template Predicted Secondary structure																								.	.	.
Template SS confidence
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.				.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions