Job Description P0A8W0 Confidence 55.28% Date Thu Jan 5 11:08:49 GMT 2012 Rank 354 Aligned Residues 80 % Identity 11% Template d1r7ja_ SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Archaeal DNA-binding protein Resolution 1.47

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		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	K	K	L	S	E	M	V	E	E	E	L	E	Q	M	I	R	R	R	E	F	G	E	G	E	Q	L	P	S	E	R	E	L	M	A	F	F	N	V	G	R	P	S	V	R	E	A	L	A	A	L	K	R	K	G	L	V	Q	I	N	N	G	E	R	A	R	V	S	R	P	S	A	D	T	I	I	G	E	L	S
Query Conservation
Alig confidence															.						.	.	.	.	.	.	.	.																																				.
Template Conservation															.						.	.	.	.	.	.	.	.																																				.
Template Sequence		K	K	S	K	L	E	I	I	Q	A	I	L	E	.	A	C	K	S	G	.	.	.	.	.	.	.	.	S	P	K	T	R	I	M	Y	G	A	N	L	S	Y	A	L	T	G	R	Y	I	K	M	L	M	D	L	E	I	I	R	Q	E	G	K	.	Q	Y	M	L	T	K	K	G	E	E	L	L	E	D	I	R	K
Template Known Secondary structure															.			T	T		.	.	.	.	.	.	.	.	B										T																T	T	S					T	T	.
Template Predicted Secondary structure															.						.	.	.	.	.	.	.	.																																				.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.		.	.	.	.	20									.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.		.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
		109	110	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	M	A	K	D	F	L	S	H	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	N	E	M	R	K	N	M	D	Q
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		73	.	.	.	.	.	.	80	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions