Job Description P0A8W0 Confidence 91.62% Date Thu Jan 5 11:08:49 GMT 2012 Rank 188 Aligned Residues 90 % Identity 16% Template d1okra_ SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Penicillinase repressor Resolution 2.4

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		57	.	.	60	.	.	.	.	.					.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.			90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
Predicted Secondary structure											.	.	.	.																									.	.
Query SS confidence											.	.	.	.																									.	.
Query Sequence		S	E	R	E	L	M	A	F	F	.	.	.	.	N	V	G	R	P	S	V	R	E	A	L	A	A	L	K	R	K	G	L	V	Q	I	N	N	.	.	G	E	R	A	R	V	S	R	P	S	A	D	T	I	I	G	E	L	S	G	M	A	K	D	F	L	S	H	P	G	G	I	A	H	F	E	Q	L	R	L	F
Query Conservation											.	.	.	.																									.	.
Alig confidence											.	.	.	.																									.	.																			.	.	.	.	.	.	.	.	.	.
Template Conservation																																																											.	.	.	.	.	.	.	.	.	.
Template Sequence		S	A	N	N	I	I	E	E	I	Q	M	Q	K	D	W	S	P	K	T	I	R	T	L	I	T	R	L	Y	K	K	G	F	I	D	R	K	K	D	N	K	I	F	Q	Y	Y	S	L	V	E	E	S	D	I	K	Y	K	T	.	.	.	.	.	.	.	.	.	.	S	K	N	F	I	N	K	V	Y	K	G	G	F
Template Known Secondary structure																																T	S							T	T							S	S										.	.	.	.	.	.	.	.	.	.									S	T	T
Template Predicted Secondary structure																																																											.	.	.	.	.	.	.	.	.	.
Template SS confidence
		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.											.	.	.	.	.	.	.	90	.	.	.	.	.
		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	E	S	S	L	V	R	Y	A	A	E	H	A	T	D	E	Q	I	D	L	L	A	K	A	L	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	S	L	V	L	N	F	V	E	K	E	D	L	S	Q	D	E	I	E	E	L	R	N	I	L	N
Template Known Secondary structure												S															T
Template Predicted Secondary structure
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions