Job Description P0A8W0 Confidence 38.58% Date Thu Jan 5 11:08:49 GMT 2012 Rank 456 Aligned Residues 65 % Identity 9% Template c3txmA_ PDB info PDB header:hydrolase, protein binding Chain: A: PDB Molecule:26s proteasome regulatory complex subunit p42b; PDBTitle: crystal structure of rpn6 from drosophila melanogaster, gd(3+) complex Resolution 3.00 Å

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		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.			.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																									.	.
Query SS confidence																																																									.	.
Query Sequence		E	M	V	E	E	E	L	E	Q	M	I	R	R	R	E	F	G	E	G	E	Q	L	P	S	E	R	E	L	M	A	F	F	N	V	G	R	P	S	V	R	E	A	L	A	A	L	K	R	K	G	L	V	Q	I	N	.	.	N	G	E	R	A	R	V	S	R	P	S
Query Conservation																																																									.	.
Alig confidence																								.																																	.	.
Template Conservation																								.
Template Sequence		G	T	L	Y	D	T	M	L	E	Q	N	L	C	R	I	I	E	P	Y	S	R	V	.	Q	V	A	H	V	A	E	S	I	Q	L	P	M	P	Q	V	E	K	K	L	S	Q	M	I	L	D	K	K	F	S	G	I	L	D	Q	G	E	G	V	L	I	V	F	E	E
Template Known Secondary structure																		T	T		S			.										T	S															T	T	S	S						T	T	T	T
Template Predicted Secondary structure																								.
Template SS confidence
		324	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.		.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions