Return to main results Retrieve Phyre Job Id

Job DescriptionP0A8W0
Confidence94.92%DateThu Jan 5 11:08:49 GMT 2012
Rank121Aligned Residues75
% Identity13%Templatec2kkoB_
PDB info PDB header:dna binding proteinChain: B: PDB Molecule:possible transcriptional regulatory protein PDBTitle: solution nmr structure of the homodimeric winged helix-turn-2 helix dna-binding domain (fragment 1-100) mb0332 from3 mycobacterium bovis, a possible arsr-family transcriptional4 regulator. northeast structural genomics consortium target5 mbr242e.
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   32.......40.........50.........60.........70.........80.........90.........100.........110.
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Query Sequence  LSEMVEEELEQMIRRREFGEGEQLPSERELMAFFNVGRPSVREALAALKRKGLVQINNGERARVSRPSADTIIGELSGMA
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Template Sequence  LANGRRLQILDLLAQGER. . . . . . . AVEAIATATGMNLTTASANLQALKSGGLVEARREGTRQYYRIAGEDVARLFALVQ
Template Known Secondary structure  T
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   22.......30......... 40.........50.........60.........70.........80.........90....
 
   112.
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Query Sequence  KD
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Template Sequence  VV
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 

   95.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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