 |
Job Description | P0A8W0 | Confidence | 88.04% | Date | Thu Jan 5 11:08:49 GMT 2012 |
Rank | 205 | Aligned Residues | 48 |
% Identity | 13% | Template | c2kfsA_ |
PDB info |
PDB header:dna-binding protein | Chain: A: PDB Molecule:conserved hypothetical regulatory protein; |
PDBTitle: nmr structure of rv2175c
|
Resolution | UNK |
|
  |   |
46 | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | R | E | F | G | E | G | E | Q | L | P | S | E | R | E | L | M | A | F | F | N | V | G | R | P | S | V | R | E | A | L | A | A | L | K | R | K | G | L | V | Q | I | N | N | G | E | R | A | R | V | S |
Query Conservation |   |
  |
|   |   |   |   |
|   |   |
|
|
|
|   |   |
|
|   |   |   |
|
|
|
|
|
|
|
|
|
|
|   |   |
|   |   |   |
|
|
|   |   |   |   |
|   |
|   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |
|   |   |   |   |   |   |
|
|   |   |
|
|
|   |
|
|
|
|
|   |   |   |
|   |   | . | . | . |   |   |   |   |   |   |
|
|
|
|   |   |
|
|   |   |   |
|
|
Template Sequence |   |
D | D | V | L | D | P | D | E | P | T | Y | D | L | P | R | V | A | E | L | L | G | V | P | V | S | K | V | A | Q | . |
. |
. |
Q | L | R | E | G | H | L | V | A | V | R | R | A | G | G | V | V | I | P |
Template Known Secondary structure |   |
B |
|
| S |
| T | T | S |
|  |  |  |  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |  | . | . | . |  |  |  | T | T | S |
|
|
|  |  |  | T | T |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  | . | . | . |  |  |  |
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | |
|
|
. | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|