Return to main results Retrieve Phyre Job Id

Job DescriptionP45469
Confidence98.48%DateThu Jan 5 12:02:46 GMT 2012
Rank222Aligned Residues181
% Identity19%Templated1wmaa1
SCOP infoNAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains Tyrosine-dependent oxidoreductases
Resolution1.24

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.... .....30......... 40.........50.........60.
Predicted Secondary structure 






.







..................










Query SS confidence 























.














. . . . . . . . . . . . . . . . . .





















Query Sequence  MSQVLITGATGLVGGHLLRMLINE. PKVNAIAAPTRRPLG. . . . . . . . . . . . . . . . . . DMPGVFNPHDPQLSDALAQVTD
Query Conservation 
 








 

  
   
   .
    
    
    ..................                      
Alig confidence 























.
..











..................





















Template Conservation   








 


 


  

   
..  


  
           
                                
Template Sequence  IHVALVTGGNKGIGLAIVRDLCRLFS. . GDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYG
Template Known Secondary structure 

SS
SSSS..SSSTT




TT
S
Template Predicted Secondary structure 








..


























Template SS confidence 















































































   4.....10.........20......... 30.........40.........50.........60.........70.........80.
 
   62.......70.........80.........90.........100.... .....110.
Predicted Secondary structure 















........
......................
Query SS confidence 










































. . . . . . . .






. . . . . . . . . . . . . . . . . . . . . .
Query Sequence  PIDIVFCCLGTTRREAGSKEAFIHADYTLVVDTALTGRRLGAQ. . . . . . . . HMLVVSA. . . . . . . . . . . . . . . . . . . . . .
Query Conservation    
                                        ........     
 ......................
Alig confidence 










































........






......................
Template Conservation                                                      

 
 
                      
Template Sequence  GLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSET
Template Known Secondary structure  S






TT

S
TGGG

TS

SS
Template Predicted Secondary structure 













































Template SS confidence 















































































   82.......90.........100.........110.........120.........130.........140.........150.........160.
 
   112.......120.........130...... ...140.........150.........160
Predicted Secondary structure  .....................








..........
















Query SS confidence  . . . . . . . . . . . . . . . . . . . . .
























. . . . . . . . . .























Query Sequence  . . . . . . . . . . . . . . . . . . . . . MGANAHSPFFYNRVKGEMEEALIAQ. . . . . . . . . . NWPKLTIARPSMLLGDRSKQRMNE
Query Conservation  .....................              
          ..........        
     
         
Alig confidence  .....................
























..........





















..
Template Conservation                                 
  


    

  
    
       
 
  
 

 
 
 
     ..
Template Sequence  ITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGPKA. .
Template Known Secondary structure 

TT
TTTTT

S

TTS



SB
STTT
TT
..
Template Predicted Secondary structure 









































..
Template SS confidence 















































































   162.......170.........180.........190.........200.........210.........220.........230.........
 
   161........170.........180.........190.... .....200
Predicted Secondary structure 











....



Query SS confidence 

































. . . .





Query Sequence  TLFAPLFRLLPGNWKSIDARDVARVMLAESMRPE. . . . HEGVTI
Query Conservation                  
   


 
 
       ....  
   
Alig confidence  ...............


















....





Template Conservation  ...............   


 
   
 

          
   
Template Sequence  . . . . . . . . . . . . . . . TKSPEEGAETPVYLALLPPDAEGPHGQFV
Template Known Secondary structure  ...............SB
TS

TT




S
Template Predicted Secondary structure  ...............










Template SS confidence 











































   240.........250.........260........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions