Job Description P45469 Confidence 97.57% Date Thu Jan 5 12:02:46 GMT 2012 Rank 325 Aligned Residues 156 % Identity 13% Template c7mdhA_ PDB info PDB header:chloroplastic malate dehydrogenase Chain: A: PDB Molecule:protein (malate dehydrogenase); PDBTitle: structural basis for light acitvation of a chloroplast enzyme. the2 structure of sorghum nadp-malate dehydrogenase in its oxidized form Resolution 2.40 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.						.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.											40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	V	L	I	T	G	A	T	G	L	V	G	G	H	L	L	R	M	L	I	N	.	.	.	.	.	E	P	K	V	N	A	I	A	A	P	T	R	R	P	L	G	.	.	.	.	.	.	.	.	.	.	D	M	P	G	V	F	N	P	H	D	P	Q	L	S	D	A	L	A	Q	V	T	D	P	I	D	I	V	F
Query Conservation																							.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	I	A	V	S	G	A	A	G	M	I	S	N	H	L	L	F	K	L	A	S	G	E	V	F	G	Q	D	Q	P	I	A	L	K	L	L	G	S	E	R	S	F	Q	A	L	E	G	V	A	M	E	L	E	D	S	L	Y	P	L	L	R	E	V	S	I	G	I	D	P	Y	E	V	F	E	D	V	D	W	A	L
Template Known Secondary structure							T	T	T	S													T	T	T	T		T	T											G	G	G													T	T	T		T	T								S						T	T	T		S
Template Predicted Secondary structure
Template SS confidence
		48	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.																	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		C	C	L	G	T	T	R	R	E	A	G	S	K	E	A	F	I	H	A	D	Y	T	L	V	V	D	T	A	L	T	G	R	R	L	G	A	Q	H	M	L	V	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	A	M	G	A	N	A	H	S	P	F	F	Y	N	R	V	K	G	E	M	E	E
Query Conservation																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	I	G	A	K	P	R	G	P	G	M	E	R	A	A	L	L	D	I	N	G	Q	I	F	A	D	Q	G	K	A	L	N	A	V	A	S	K	N	V	K	V	L	V	V	G	N	P	C	N	T	N	A	L	I	C	L	K	N	A	P	D	I	P	A	K	N	F	H	A	L	T	R	L	D	E	N	R	A	K	C
Template Known Secondary structure										T	T																									S		T	T							S	S	S											T		T	T	S		G	G	G
Template Predicted Secondary structure
Template SS confidence
		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	I	A	Q	N	W	P	K	L	T	I	A	R	P	S	M	L	L	G	D	R	S	K	Q	R	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	L	A	L	K	A	G	V	F	Y	D	K	V	S	N	V	T	I	W	G	N	H	S	T	T	Q	V
Template Known Secondary structure							T	T	S		G	G	G								B		S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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