Job Description P45469 Confidence 97.55% Date Thu Jan 5 12:02:46 GMT 2012 Rank 329 Aligned Residues 156 % Identity 15% Template c5mdhB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:malate dehydrogenase; PDBTitle: crystal structure of ternary complex of porcine cytoplasmic malate2 dehydrogenase alpha-ketomalonate and tnad at 2.4 angstroms resolution Resolution 2.40 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.						.	.	.	30	.	.	.	.	.	.	.	.	.											40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.														.	.	.	.	.	.	.	.	.	.
Query SS confidence																										.	.	.	.	.														.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	V	L	I	T	G	A	T	G	L	V	G	G	H	L	L	R	M	L	I	N	E	P	K	.	.	.	.	.	V	N	A	I	A	A	P	T	R	R	P	L	G	.	.	.	.	.	.	.	.	.	.	D	M	P	G	V	F	N	P	H	D	P	Q	L	S	D	A	L	A	Q	V	T	D	P	I	D	I	V	F
Query Conservation																										.	.	.	.	.														.	.	.	.	.	.	.	.	.	.
Alig confidence																										.	.	.	.	.														.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	V	L	V	T	G	A	A	G	Q	I	A	Y	S	L	L	Y	S	I	G	N	G	S	V	F	G	K	D	Q	P	I	I	L	V	L	L	D	I	T	P	M	M	G	V	L	D	G	V	L	M	E	L	Q	D	C	A	L	P	L	L	K	D	V	I	A	T	D	K	E	E	I	A	F	K	D	L	D	V	A	I
Template Known Secondary structure							S	T	T	S	T											T	T	T	T	T		T	T											G	G	G														T			T	T								S						T	T	T		S
Template Predicted Secondary structure
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.		.	.	.																110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
Predicted Secondary structure																																									.				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																									.				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		C	C	L	G	T	T	R	R	E	A	G	S	K	E	A	F	I	H	A	D	Y	T	L	V	V	D	T	A	L	T	G	R	R	L	G	A	Q	H	M	.	L	V	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	A	M	G	A	N	A	H	S	P	F	F	Y	N	R	V	K	G	E	M	E	E
Query Conservation																																									.				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																									.				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	V	G	S	M	P	R	R	D	G	M	E	R	K	D	L	L	K	A	N	V	K	I	F	K	C	Q	G	A	A	L	D	K	Y	A	K	K	S	V	K	V	I	V	V	G	N	P	A	N	T	N	C	L	T	A	S	K	S	A	P	S	I	P	K	E	N	F	S	C	L	T	R	L	D	H	N	R	A	K	A
Template Known Secondary structure					S					S	S	S		S		T	T																			S		T	T							S	S	S											T		T	T	S		G	G	G
Template Predicted Secondary structure
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	I	A	Q	N	W	P	K	L	T	I	A	R	P	S	M	L	L	G	D	R	S	K	Q	R	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	I	A	L	K	L	G	V	T	S	D	D	V	K	N	V	I	I	W	G	N	H	S	S	T	Q	Y
Template Known Secondary structure								T			G	G	G								B		S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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