Job Description P45469 Confidence 97.15% Date Thu Jan 5 12:02:46 GMT 2012 Rank 375 Aligned Residues 187 % Identity 19% Template c3qp9C_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:type i polyketide synthase pikaii; PDBTitle: the structure of a c2-type ketoreductase from a modular polyketide2 synthase Resolution 1.88 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40												.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.							.	.	.
Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.
Query SS confidence																																									.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.
Query Sequence		S	Q	V	L	I	T	G	A	T	G	L	V	G	G	H	L	L	R	M	L	I	N	E	P	K	V	N	A	I	A	A	P	T	R	R	P	L	G	D	.	.	.	.	.	.	.	.	.	.	.	M	P	G	V	F	N	P	H	D	P	Q	L	S	D	A	L	A	Q	V	T	D	.	.	.	.	.	.	P	I	D
Query Conservation																																									.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.
Alig confidence																												.													.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.
Template Conservation																												.
Template Sequence		G	T	V	L	V	T	G	A	E	E	P	A	A	A	E	A	A	R	R	L	A	R	D	G	A	G	.	H	L	L	L	H	T	T	P	S	G	G	L	A	G	L	V	A	E	L	A	D	L	G	A	T	A	T	V	V	T	C	D	L	T	D	A	E	A	A	A	R	L	L	A	G	V	S	D	A	H	P	L	S
Template Known Secondary structure		S					S		T	T	S														T			.																							T										T	T	S										T	S		S	S	S
Template Predicted Secondary structure																												.
Template SS confidence
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.		.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.							.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.				.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.																							.	.	.
Query SS confidence																					.	.	.	.	.	.																							.	.	.
Query Sequence		I	V	F	C	C	L	G	T	T	R	R	E	A	G	S	K	E	A	F	.	.	.	.	.	.	I	H	A	D	Y	T	L	V	V	D	T	A	L	T	G	R	R	L	G	A	Q	H	.	.	.	M	L	V	V	S	A	M	G	A	N	A	H	S	P	F	F	Y	N	R	V	K	G	E	M	E	E	A	L	I	A
Query Conservation																					.	.	.	.	.	.																							.	.	.
Alig confidence																					.	.	.	.	.	.																							.	.	.
Template Conservation
Template Sequence		A	V	L	H	L	P	P	T	V	D	S	E	P	L	A	A	T	D	A	D	A	L	A	R	V	V	T	A	K	A	T	A	A	L	H	L	D	R	L	L	R	E	A	G	G	R	P	P	V	L	V	L	F	S	S	V	A	A	I	W	G	G	A	G	Q	G	A	Y	A	A	G	T	A	F	L	D	A	L	A	G
Template Known Secondary structure													B		T	T	T																									T	T														G	G	G	T	T			T	T	B															T
Template Predicted Secondary structure
Template SS confidence
		324	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.
		136				.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure			.	.	.
Query SS confidence			.	.	.
Query Sequence		Q	.	.	.	N	W	P	K	L	T	I	A	R	P	S	M	L	L	G	D	R	S	K	Q	R	M	N	E	T	L	F	A	P	L	F	R	L	L	P	G	N	W	K	S	I	D	A	R	D	V	A	R	V	M	L	A	E	S	M	R	P	E	H
Query Conservation			.	.	.
Alig confidence			.	.	.																															.	.	.	.	.	.
Template Conservation																																				.	.	.	.	.	.
Template Sequence		Q	H	R	A	D	G	P	T	V	T	S	V	A	W	S	P	W	E	G	S	R	V	T	E	G	A	T	G	E	R	L	R	R	L	.	.	.	.	.	.	G	L	R	P	L	A	P	A	T	A	L	T	A	L	D	T	A	L	G	H	G	D	T
Template Known Secondary structure		S			S	S												B	T	T	S	G	G	G	S											.	.	.	.	.	.	T	B			B															T	T		S
Template Predicted Secondary structure																																				.	.	.	.	.	.
Template SS confidence
		407	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440							.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions