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Job DescriptionP45469
Confidence98.70%DateThu Jan 5 12:02:46 GMT 2012
Rank140Aligned Residues199
% Identity14%Templatec3osuA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:3-oxoacyl-[acyl-carrier-protein] reductase; PDBTitle: crystal structure of the 3-oxoacyl-acyl carrier protein reductase,2 fabg, from staphylococcus aureus
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40 .........50.........60 ..
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Query Sequence  SQVLITGATGLVGGHLLRMLINEPKVNAIAAPTRRPLGD. . . . . . . . . . . . MPGVFNPHDPQLSDALAQVT. . . . . . . DP
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Template Sequence  KSALVTGASRGIGRSIALQLAEEG. . YNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAXIKEVVSQFGS
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TT
SSTT..
SS
TTS


TT
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Query Sequence  IDIVFCCLGTTRREAGSKEA. . . . . . . . . . FIHADYTLVVDTALTGRRLGAQHMLVVSAMG. . ANAHSPFFYNRVKGEME
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Template Sequence  LDVLVNNAGITRDNLLXRXKEQEWDDVIDTNLKGVFNCIQKATPQXLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVI
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   83......90.........100.........110.........120.........130.........140.........150.........160..
 
   131... .....140.........150.........160.........170.........180.........190.... .....200..
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Query Sequence  EALI. . . . . . AQNWPKLTIARPSMLLGDRSKQRMNETLFAPLFRLLPGNWKSIDARDVARVMLAESMRPE. . HEGVTILS
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Template Sequence  GLTKSAARELASRGITVNAVAPGFIVSDXTDALSDELKEQXLTQIPLAR. . FGQDTDIANTVAFLASDKAKYITGQTIHV
Template Known Secondary structure  GGGT
SBGGG

S
S
TT
TT
S..
B
TSGGGTT

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   163......170.........180.........190.........200.........210. ........220.........230.........240
 
   203.
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Query Sequence  SS
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Template Sequence  NG
Template Known Secondary structure  ST
Template Predicted Secondary structure 

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   241.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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