Job Description P45469 Confidence 99.87% Date Thu Jan 5 12:02:46 GMT 2012 Rank 25 Aligned Residues 193 % Identity 13% Template c3nzoB_ PDB info PDB header:lyase Chain: B: PDB Molecule:udp-n-acetylglucosamine 4,6-dehydratase; PDBTitle: udp-n-acetylglucosamine 4,6-dehydratase from vibrio fischeri. Resolution 2.10 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.																40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.			60	.	.	.	.
Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.
Query SS confidence																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.
Query Sequence		S	Q	V	L	I	T	G	A	T	G	L	V	G	G	H	L	L	R	M	L	I	N	E	P	K	V	N	A	I	A	A	P	T	R	R	P	L	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	M	P	G	V	F	N	P	H	D	P	Q	L	S	D	A	L	A	Q	V	.	.	T	D	P	I	D
Query Conservation																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.
Alig confidence																												.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.
Template Conservation																												.
Template Sequence		S	R	F	L	V	L	G	G	A	G	S	I	G	Q	A	V	T	K	E	I	F	K	R	N	P	Q	.	K	L	H	V	V	D	I	S	E	N	N	X	V	E	L	V	R	D	I	R	S	S	F	G	Y	I	N	G	D	F	Q	T	F	A	L	D	I	G	S	I	E	Y	D	A	F	I	K	A	D	G	Q	Y	D
Template Known Secondary structure								T	T	T	S												T	T			S	.							S																				S	S									T	T	S														S
Template Predicted Secondary structure																												.
Template SS confidence
		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.		.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
		65	.	.	.	.	70	.	.	.	.	.	.	.	.					.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.		.	.	.	.	.
Predicted Secondary structure																.	.	.	.																																																									.
Query SS confidence																.	.	.	.																																																									.
Query Sequence		I	V	F	C	C	L	G	T	T	R	R	E	A	G	.	.	.	.	S	K	E	A	F	I	H	A	D	Y	T	L	V	V	D	T	A	L	T	G	R	R	L	G	A	Q	H	M	L	V	V	S	A	M	G	A	N	A	H	S	P	F	F	Y	N	R	V	K	G	E	M	E	E	A	L	I	.	A	Q	N	W	P
Query Conservation																.	.	.	.																																																									.
Alig confidence																.	.	.	.																																							.																		.
Template Conservation																																																										.
Template Sequence		Y	V	L	N	L	S	A	L	K	H	V	R	S	E	K	D	P	F	T	L	X	R	X	I	D	V	N	V	F	N	T	D	K	T	I	Q	Q	S	I	D	A	G	A	K	K	Y	F	C	V	S	T	D	K	A	A	N	.	P	V	N	X	X	G	A	S	K	R	I	X	E	X	F	L	X	R	K	S	E	E	I
Template Known Secondary structure												G	G	G	G	S	S												T													T	T		S								S		S	S		.			S																	T	T	T	S
Template Predicted Secondary structure																																																										.
Template SS confidence
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.		.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	L	T	I	A	R	P	S	M	L	L	G	D	R	S	K	Q	R	M	N	E	T	L	F	A	P	L	F	R	L	L	P	G	N	W	K	S	I	D	A	R	D	V	A	R	V	M	L	A	E	S	M	R	P	E	H	E	G	V	T	I	L	S	S	S	E
Query Conservation
Alig confidence																		.	.	.	.	.	.	.	.	.
Template Conservation																		.	.	.	.	.	.	.	.	.
Template Sequence		A	I	S	T	A	R	F	A	N	V	A	F	S	D	G	S	.	.	.	.	.	.	.	.	.	R	I	Q	K	N	Q	P	I	K	R	Y	F	V	T	P	Q	E	S	G	E	L	C	L	X	S	C	I	F	G	E	N	R	D	I	F	F	P	K	D	X	A
Template Known Secondary structure											B	T	T		T	T		.	.	.	.	.	.	.	.	.		T	T	T	T								B																		T	T									S
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.
Template SS confidence
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.										.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions