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Job DescriptionP45469
Confidence97.76%DateThu Jan 5 12:02:46 GMT 2012
Rank304Aligned Residues151
% Identity9%Templatec3fi9B_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:malate dehydrogenase; PDBTitle: crystal structure of malate dehydrogenase from porphyromonas2 gingivalis
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50. ........60.........70...
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Query Sequence  MSQVLITGATGLVGGHLLRMLINEPKVNAIAAPTRRPLGDMPGVFNPHDPQ. . . . . . . LSDALAQVTDPIDIVFCCLGTT
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Template Sequence  EEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCGFEGLNLTFTSDIKEALTDAKYIVSSGG. .
Template Known Secondary structure  SSSTTSTT

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   6...10.........20.........30.........40.........50.........60.........70.........80...
 
   74.....80.........90.........100..... ....110.........120.... .....130........
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Query Sequence  RREAGSKEAFIHADYTLVVDTALTGRRLGAQH. MLVVSAMGANAHSPFFYNR. . . . . . . . . . . . . . VKGEMEEALIAQNW
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Template Sequence  . . . . . TREDLLKGNAEIAAQLGKDIKSYCPDCKHVIIIFNPADITGLVTLIYSGLKPSQVTTLAGLDSTRLQSELAKHFG
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   91........100.........110.........120.........130.........140.........150.........160.....
 
   139140.........150........
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Query Sequence  PKLTIARPSMLLGDRSKQRM
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Template Sequence  IKQSLVTNTRTYGGHGEQMA
Template Known Secondary structure  S
GGG


SSGGG
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   166...170.........180.....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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