Job Description P45469 Confidence 99.79% Date Thu Jan 5 12:02:46 GMT 2012 Rank 55 Aligned Residues 209 % Identity 15% Template c3enkB_ PDB info PDB header:isomerase Chain: B: PDB Molecule:udp-glucose 4-epimerase; PDBTitle: 1.9a crystal structure of udp-glucose 4-epimerase from2 burkholderia pseudomallei Resolution 1.90 Å

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		1	.				.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.													.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.
Predicted Secondary structure				.	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence				.	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	S	.	.	.	Q	V	L	I	T	G	A	T	G	L	V	G	G	H	L	L	R	M	L	I	N	E	P	K	V	N	A	I	A	A	P	T	R	R	P	L	G	D	M	.	.	.	.	.	.	.	.	.	.	.	.	P	G	V	F	N	P	H	D	P	Q	L	S	D	A	L	A	Q	V	T	D	P	I	D	I
Query Conservation				.	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.	.	.																								.	.															.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																														.	.
Template Sequence		M	S	T	K	G	T	I	L	V	T	G	G	A	G	Y	I	G	S	H	T	A	V	E	L	L	A	H	G	.	.	Y	D	V	V	I	A	D	N	L	V	N	S	K	R	E	A	I	A	R	I	E	K	I	T	G	K	T	P	A	F	H	E	T	D	V	S	D	E	R	A	L	A	R	I	F	D	A	H	P	I
Template Known Secondary structure				S	S							T	T	T	S													T	T	.	.										S	S	S		T											S										T	T												S
Template Predicted Secondary structure																														.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.			.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		66	.	.	.	70	.	.	.	.	.	.					.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.																		.	.	.
Predicted Secondary structure													.	.	.	.																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.	.																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	F	C	C	L	G	T	T	R	R	E	.	.	.	.	A	G	S	K	E	A	F	I	H	A	D	Y	T	L	V	V	D	T	A	L	T	G	R	R	L	G	A	Q	H	M	L	V	V	S	A	M	G	A	N	A	H	S	P	F	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	N	R
Query Conservation													.	.	.	.																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	A	A	I	H	F	A	A	L	K	A	V	G	E	S	V	A	K	P	I	E	Y	Y	R	N	N	L	D	S	L	L	S	L	L	R	V	M	R	E	R	A	V	K	R	I	V	F	S	S	S	A	T	V	Y	G	V	P	E	R	S	P	I	D	E	T	F	P	L	S	A	T	N	P	Y	G	Q	T	K	L	M
Template Known Secondary structure																																									T	T										G	G	G	B		S		S	S	S	S	B		T	T	S			B		S	S
Template Predicted Secondary structure
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.																											.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	K	G	E	M	E	E	A	L	I	A	Q	N	W	P	K	L	T	I	A	R	P	S	M	L	L	G	D	R	S	K	Q	R	M	N	E	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	F	A	P	L	F	R	L	L	P	G	N	W	K	S	I	D
Query Conservation																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	E	Q	I	L	R	D	V	E	A	A	D	P	S	W	R	V	A	T	L	R	Y	F	N	P	V	G	A	H	E	S	G	L	I	G	E	D	P	A	G	I	P	N	N	L	M	P	Y	V	A	Q	V	A	V	G	K	L	E	K	L	R	V	F	G	S	D	Y	P	T	P	D	G	T	G	V	R	D	Y	I	H
Template Known Secondary structure														T	T																T	T	S	S	S					S	S	S		S	S											T	S	S	S							S		S	S	S	T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.				.	.	200	.	.	.	.	.				.	.	.	.	210	.
Predicted Secondary structure																					.	.	.									.	.	.
Query SS confidence																					.	.	.									.	.	.
Query Sequence		A	R	D	V	A	R	V	M	L	A	E	S	M	R	P	E	H	E	G	.	.	.	V	T	I	L	S	S	S	E	.	.	.	L	R	K	R	A	E
Query Conservation																					.	.	.									.	.	.
Alig confidence																					.	.	.									.	.	.
Template Conservation
Template Sequence		V	V	D	L	A	R	G	H	I	A	A	L	D	A	L	E	R	R	D	A	S	L	T	V	N	L	G	T	G	R	G	Y	S	V	L	E	V	V	R
Template Known Secondary structure																			T	T	S							S		S
Template Predicted Secondary structure
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions