Job Description P45469 Confidence 98.73% Date Thu Jan 5 12:02:46 GMT 2012 Rank 132 Aligned Residues 192 % Identity 14% Template c3diiB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:short-chain dehydrogenase/reductase sdr; PDBTitle: crystal structure of a carbohydrate specific scor enzyme2 from clostridium thermocellum, ligand-free form Resolution 1.70 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.														.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.
Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																										.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	Q	V	L	I	T	G	A	T	G	L	V	G	G	H	L	L	R	M	L	I	N	E	P	K	V	N	A	I	A	A	P	T	R	R	P	L	G	D	M	.	.	.	.	.	.	.	.	.	.	.	.	.	P	G	V	F	N	P	H	D	P	Q	L	S	D	A	L	A	Q	V	T	D	P	I	D	I	V	F	C
Query Conservation																																										.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																										.	.															.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																										.	.
Template Sequence		R	G	V	I	V	T	G	G	G	H	G	I	G	K	Q	I	C	L	D	F	L	E	A	G	.	.	D	K	V	C	F	I	D	I	D	E	K	R	S	A	D	F	A	K	E	R	P	N	L	F	Y	F	H	G	D	V	A	D	P	L	T	L	K	K	F	V	E	Y	A	M	E	K	L	Q	R	I	D	V	L	V
Template Known Secondary structure								S	T	T	S													T	T	.	.								S										T	T		T	T								T	T																	S
Template Predicted Secondary structure																										.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.			.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.											.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.																																																					.	.
Query SS confidence																		.	.	.	.	.	.	.	.	.	.																																																					.	.
Query Sequence		C	L	G	T	T	R	R	E	A	G	S	K	E	A	F	I	.	.	.	.	.	.	.	.	.	.	H	A	D	Y	T	L	V	V	D	T	A	L	T	G	R	R	L	G	A	Q	H	M	L	V	V	S	A	M	G	A	N	A	H	S	P	F	F	Y	N	R	V	K	G	E	M	E	E	A	L	I	A	Q	.	.
Query Conservation																		.	.	.	.	.	.	.	.	.	.																																																					.	.
Alig confidence																		.	.	.	.	.	.	.	.	.	.																																																					.	.
Template Conservation
Template Sequence		N	N	A	C	G	S	K	G	I	L	S	S	L	L	Y	E	E	F	D	Y	I	L	S	V	G	L	K	A	P	Y	E	L	S	R	L	C	R	D	E	L	I	K	N	K	G	R	I	I	N	I	A	S	T	R	A	F	Q	S	E	P	D	S	E	A	Y	A	S	A	K	G	G	I	V	A	L	T	H	A	L	A
Template Known Secondary structure										G	G	G	T														T										T								T									G	G	G	T	S			T	T
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
						137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure		.	.	.	.
Query SS confidence		.	.	.	.
Query Sequence		.	.	.	.	N	W	P	K	L	T	I	A	R	P	S	M	L	L	G	D	R	S	K	Q	R	M	N	E	T	L	F	A	P	L	F	R	L	L	P	G	N	W	K	S	I	D	A	R	D	V	A	R	V	M	L	A	E	S	M	R	P	E	H	E	G	V	T	I	L	S	S	S
Query Conservation		.	.	.	.
Alig confidence		.	.	.	.																														.	.	.	.	.	.	.	.	.
Template Conservation																																			.	.	.	.	.	.	.	.	.
Template Sequence		M	S	L	G	P	D	V	L	V	N	C	I	A	P	G	W	I	N	V	T	E	F	T	Q	E	D	C	A	A	I	P	A	G	.	.	.	.	.	.	.	.	.	K	V	G	T	P	K	D	I	S	N	M	V	L	F	L	C	Q	Q	D	F	I	T	G	E	T	I	I	V	D	G
Template Known Secondary structure					T	T	T	S									S	B												T	S	T	T	S	.	.	.	.	.	.	.	.	.	S		B														T		S	S			S						S	T
Template Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.										.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions