Job Description P45469 Confidence 98.25% Date Thu Jan 5 12:02:46 GMT 2012 Rank 253 Aligned Residues 184 % Identity 12% Template c2vz8B_ PDB info PDB header:transferase Chain: B: PDB Molecule:fatty acid synthase; PDBTitle: crystal structure of mammalian fatty acid synthase Resolution 3.2 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.															.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60							.
Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.
Query SS confidence																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.
Query Sequence		S	Q	V	L	I	T	G	A	T	G	L	V	G	G	H	L	L	R	M	L	I	N	E	P	K	V	N	A	I	A	A	P	T	R	R	P	L	G	D	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	G	V	F	N	P	H	D	P	Q	L	S	D	A	L	A	Q	V	T	.	.	.	.	.	.	D
Query Conservation																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.
Alig confidence																												.														.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.
Template Conservation																												.
Template Sequence		K	S	Y	V	I	T	G	G	L	G	G	F	G	L	Q	L	A	Q	W	L	R	L	R	G	A	Q	.	K	L	V	L	T	S	R	S	G	I	R	T	G	Y	Q	A	R	Q	V	R	E	W	R	R	Q	G	V	Q	V	L	V	S	T	S	N	A	S	S	L	D	G	A	R	S	L	I	T	E	A	T	Q	L	G
Template Known Secondary structure								S	T	T	S													T	T			.							S	S				S													T	T										S	S	S															S
Template Predicted Secondary structure																												.
Template SS confidence
		1885	.	.	.	.	1890	.	.	.	.	.	.	.	.	.	1900	.	.	.	.	.	.	.	.	.	1910		.	.	.	.	.	.	.	.	.	1920	.	.	.	.	.	.	.	.	.	1930	.	.	.	.	.	.	.	.	.	1940	.	.	.	.	.	.	.	.	.	1950	.	.	.	.	.	.	.	.	.	1960	.	.	.
		62	.	.	.	.	.	.	.	70	.	.	.							.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.			.	.	.	.	.	.	.	.	110	.	.					.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.																													.	.												.	.	.	.
Query SS confidence														.	.	.	.	.	.																													.	.												.	.	.	.
Query Sequence		P	I	D	I	V	F	C	C	L	G	T	T	.	.	.	.	.	.	R	R	E	A	G	S	K	E	A	F	I	H	A	D	Y	T	L	V	V	D	T	A	L	T	G	R	R	L	.	.	G	A	Q	H	M	L	V	V	S	A	M	.	.	.	.	G	A	N	A	H	S	P	F	F	Y	N	R	V	K	G	E	M
Query Conservation														.	.	.	.	.	.																													.	.												.	.	.	.
Alig confidence														.	.	.	.	.	.																													.	.												.	.	.	.
Template Conservation
Template Sequence		P	V	G	G	V	F	N	L	A	M	V	L	R	D	A	V	L	E	N	Q	T	P	E	F	F	Q	D	V	S	K	P	K	Y	S	G	T	A	N	L	D	R	V	T	R	E	A	C	P	E	L	D	Y	F	V	I	F	S	S	V	S	C	G	R	G	N	A	G	Q	A	N	Y	G	F	A	N	S	A	M	E	R
Template Known Secondary structure																		S	T	T			T	T						T	T	T	T																T	T														T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		1964	.	.	.	.	.	1970	.	.	.	.	.	.	.	.	.	1980	.	.	.	.	.	.	.	.	.	1990	.	.	.	.	.	.	.	.	.	2000	.	.	.	.	.	.	.	.	.	2010	.	.	.	.	.	.	.	.	.	2020	.	.	.	.	.	.	.	.	.	2030	.	.	.	.	.	.	.	.	.	2040	.	.	.
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	E	A	L	I	A	Q	N	W	P	K	L	T	I	A	R	P	S	M	L	L	G	D	R	S	K	Q	R	M	N	E	T	L	F	A	P	L	F	R	L	L	P	G	N	W	K	S	I	D	A	R	D	V	A	R	V	M	L	A	E	S	M	R	P	E	H
Query Conservation
Alig confidence																																.	.	.	.	.	.	.	.	.
Template Conservation																																.	.	.	.	.	.	.	.	.
Template Sequence		I	C	E	K	R	R	H	D	G	L	P	G	L	A	V	Q	W	G	A	I	G	D	V	G	V	V	L	E	N	D	.	.	.	.	.	.	.	.	.	T	V	I	G	G	T	L	P	Q	R	I	A	S	C	L	E	V	L	D	L	F	L	S	Q	P	H	P
Template Known Secondary structure									T	T	S										B		T	T	S	T	T	T				.	.	.	.	.	.	.	.	.			T	T	S				B														T		S		S
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.	.
Template SS confidence
		2044	.	.	.	.	.	2050	.	.	.	.	.	.	.	.	.	2060	.	.	.	.	.	.	.	.	.	2070	.	.	.										.	.	.	.	.	.	2080	.	.	.	.	.	.	.	.	.	2090	.	.	.	.	.	.	.	.	.	2100

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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